Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 MAPK10-322ENST00000641485 4530 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 Y_RNA.11-201ENST00000362375 109 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-37P-201ENST00000362692 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-11P-201ENST00000364234 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-7-201ENST00000364784 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-8-201ENST00000365467 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-25P-201ENST00000383873 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-1-201ENST00000383898 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-48P-201ENST00000384161 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-36P-201ENST00000384172 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-4P-201ENST00000384205 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-5P-201ENST00000384238 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-3P-201ENST00000384314 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-16P-201ENST00000384385 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-15P-201ENST00000384534 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-2-201ENST00000384627 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-29P-201ENST00000384637 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-9-201ENST00000384776 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-33P-201ENST00000384793 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 MIR548F5-201ENST00000408421 86 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC016831.2-201ENST00000417179 352 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 ATG3P1-201ENST00000419507 911 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 FABP5P14-201ENST00000437273 393 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC107399.1-201ENST00000451226 265 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC013470.1-201ENST00000453438 462 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RPL23AP62-201ENST00000463396 453 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AP002884.2-201ENST00000471647 395 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC092185.1-201ENST00000491371 97 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-273P-201ENST00000516937 96 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 MIR4444-1-201ENST00000581696 74 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 MIR4444-2-201ENST00000584390 74 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AL451007.1-201ENST00000595491 289 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-6P-201ENST00000606623 107 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 MIR1302-1-201ENST00000637932 143 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 AC093908.1-201ENST00000623125 8092 ntBASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
TCRBV7S3A2A0A539 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 SNORA63.1-201ENST00000362493 131 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-95P-201ENST00000384697 107 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 HIST1H2APS3-201ENST00000403259 134 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RPS3AP52-201ENST00000435639 297 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 BTF3P15-201ENST00000455606 336 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC034236.1-201ENST00000469891 373 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RPL23AP45-201ENST00000476406 468 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RPS29P2-201ENST00000479278 136 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC006445.1-201ENST00000491925 405 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC096745.1-201ENST00000509945 370 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC113155.1-201ENST00000511141 769 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 Y_RNA.687-201ENST00000516558 91 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC109479.2-201ENST00000517842 174 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC021739.1-201ENST00000559631 174 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AL355375.2-201ENST00000574825 175 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 HMGN2P15-201ENST00000585707 270 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 ELOCP5-201ENST00000604924 333 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AC069234.5-201ENST00000611056 416 ntBASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3□□□□□ -1.93
TCRBV7S3A2A0A539 RNU4-79P-201ENST00000362764 141 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 RNU1-35P-201ENST00000362782 153 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 Y_RNA.387-201ENST00000383918 102 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 Y_RNA.535-201ENST00000384612 99 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 HIGD1AP2-201ENST00000446367 280 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 AC130509.1-201ENST00000464158 433 ntBASIC2.99□□□□□ -1.93
TCRBV7S3A2A0A539 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms