Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNU6-1122P-201ENST00000384449 107 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 EIF1P1-201ENST00000421436 341 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 OOSP1P1-201ENST00000423265 274 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 MTND2P4-201ENST00000445034 1004 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU7-95P-201ENST00000459222 64 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 snoU13.26-201ENST00000459452 105 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC087343.1-201ENST00000477341 475 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 HMGB1P28-201ENST00000507778 552 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC009902.1-201ENST00000519351 183 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AP001981.2-201ENST00000603241 418 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC112220.2-201ENST00000605513 533 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AL590240.4-201ENST00000616908 390 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 MIR8065-201ENST00000620577 100 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 AC068205.3-201ENST00000636385 468 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 DDX43P2-201ENST00000604753 1354 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RPL23AP32-201ENST00000395315 459 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 MTCO1P56-201ENST00000401674 224 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 AL359634.1-202ENST00000404721 284 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 MED28P2-201ENST00000475771 317 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RPL30P6-201ENST00000475925 342 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 AC026414.1-201ENST00000504046 698 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-583P-201ENST00000516012 92 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 SNORA31.3-201ENST00000516029 96 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-1102P-201ENST00000516149 96 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 SNRPGP1-201ENST00000553864 222 ntBASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.66□□□□□ -2.3
TRBV27A0A0K0K1C4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.65□□□□□ -2.3
TRBV27A0A0K0K1C4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-707P-201ENST00000364647 95 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-296P-201ENST00000384608 107 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR29B2-201ENST00000385055 81 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU4-62P-201ENST00000410125 130 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 FTH1P12-201ENST00000432137 551 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC012308.1-201ENST00000451232 178 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 OR2AQ1P-201ENST00000451972 200 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC130509.1-201ENST00000464158 433 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC104563.1-201ENST00000476147 376 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA31.19-201ENST00000517079 126 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC079148.1-201ENST00000565944 819 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC126365.2-201ENST00000580630 379 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AL020996.3-201ENST00000606617 222 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR6078-201ENST00000611069 100 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AL157834.3-201ENST00000615543 103 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC018926.1-201ENST00000616335 435 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR3529-201ENST00000637713 78 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 AC241585.2-209ENST00000638217 143 ntBASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-1210P-201ENST00000363775 107 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 CBX3P9-201ENST00000402326 552 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU2-42P-201ENST00000410697 113 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 RPL21P111-201ENST00000418453 477 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AL669831.1-202ENST00000428504 417 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AL592045.1-201ENST00000429867 352 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AL078601.1-201ENST00000444542 271 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 ELOCP30-201ENST00000447108 299 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 RPL9P9-202ENST00000466501 579 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORD116-28-201ENST00000516123 91 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-143P-201ENST00000516942 93 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AL356057.1-201ENST00000533798 831 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AL133153.1-201ENST00000557756 303 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AC136618.2-201ENST00000575091 400 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 BNIP3P30-201ENST00000601184 574 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 OR4H6P-202ENST00000603819 340 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 BNIP3P19-201ENST00000605397 577 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AP003485.1-201ENST00000625093 753 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 AC092447.10-201ENST00000620607 1652 ntBASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
TRBV27A0A0K0K1C4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms