Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC022616.8-201ENST00000533569 253 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC018630.3-201ENST00000542637 96 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 SUB1P3-201ENST00000564581 315 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 MIR3660-201ENST00000584845 100 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 WISP1-OT1-201ENST00000602893 642 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC073410.2-201ENST00000603240 332 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 BNIP3P9-201ENST00000603714 553 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.6-201ENST00000603753 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.11-201ENST00000604059 253 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC008162.1-201ENST00000604718 254 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.1-201ENST00000604752 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.2-201ENST00000604983 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.5-201ENST00000605253 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.4-201ENST00000605279 254 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.12-201ENST00000605291 253 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.8-201ENST00000605353 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL670379.7-201ENST00000605823 252 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC024060.1-201ENST00000607052 494 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF209P-201ENST00000593450 2304 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-487P-201ENST00000365430 104 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORA40.6-201ENST00000391153 128 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 MIR1284-201ENST00000408337 120 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 MTCO1P17-201ENST00000411522 491 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL359704.1-201ENST00000411586 781 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 RPS12P24-201ENST00000412619 387 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC013262.1-201ENST00000426710 252 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 USP9YP11-201ENST00000427537 717 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL591704.1-201ENST00000432574 275 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 MTCO3P5-201ENST00000433620 714 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL354941.1-201ENST00000438600 464 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL078601.1-201ENST00000444542 271 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF886P-201ENST00000450781 723 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC112492.4-201ENST00000456549 352 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 RN7SKP210-201ENST00000459176 261 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC109927.2-201ENST00000506416 303 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC113347.3-201ENST00000509113 148 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-991P-201ENST00000516168 107 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 BNIP3P26-201ENST00000600827 554 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 uc_338.15-201ENST00000615470 191 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AL136313.1-201ENST00000624804 202 ntBASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV1-1A0A0B4J248 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 CBX3P1-201ENST00000325243 554 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RNA5SP213-201ENST00000391031 106 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 PAXBP1P1-201ENST00000449315 447 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AL590365.1-201ENST00000450788 243 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC003071.1-201ENST00000451219 789 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC099513.1-201ENST00000490423 301 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-1053P-201ENST00000515930 101 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-143P-201ENST00000516942 93 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RN7SKP256-201ENST00000517201 314 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AP005660.1-201ENST00000522972 293 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC087894.1-201ENST00000538359 518 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AL136520.1-202ENST00000555494 763 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC136618.2-201ENST00000575091 400 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC008507.2-201ENST00000588402 1176 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC023043.2-201ENST00000589678 1026 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 MTATP6P2-201ENST00000603319 678 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC007363.1-201ENST00000604736 620 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms