Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC090970.3-201ENST00000612566 866 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 AL353770.2-201ENST00000620024 78 ntBASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-546P-201ENST00000383991 107 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-1274P-201ENST00000384557 107 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 MIR597-201ENST00000384968 97 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 MIR186-201ENST00000384988 86 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-817P-201ENST00000391083 104 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 FTH1P15-201ENST00000406984 280 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU2-32P-201ENST00000411193 191 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 OR6C66P-201ENST00000414917 930 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 MTCO2P20-201ENST00000437339 673 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 SNRPEP7-201ENST00000438350 220 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC017099.1-201ENST00000448261 1028 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 BTF3P15-201ENST00000455606 336 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RPL31P58-201ENST00000469001 379 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RPL36AP21-201ENST00000490372 323 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-150P-201ENST00000516237 95 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 RNU2-53P-201ENST00000516257 147 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC022616.8-201ENST00000533569 253 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AP003034.1-201ENST00000534621 422 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AL132657.2-201ENST00000564417 358 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 AC073410.2-201ENST00000603240 332 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 uc_338.12-201ENST00000616344 181 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRAV3A0A0B4J244 ZNF29P-201ENST00000225587 168 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 Y_RNA.4-201ENST00000362333 112 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 RNU4-91P-201ENST00000364778 135 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-166P-201ENST00000384371 107 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 RNU6-843P-201ENST00000384454 104 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 RPS15AP12-201ENST00000419498 388 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AL591704.2-201ENST00000421658 181 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 snoU13.14-201ENST00000459372 104 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 MIR4781-201ENST00000585250 76 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AC005776.1-201ENST00000603164 290 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 MIR8074-201ENST00000615081 81 ntBASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRAV3A0A0B4J244 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
TRAV3A0A0B4J244 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.99-201ENST00000363138 105 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.164-201ENST00000363709 102 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.534-201ENST00000384599 112 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL603865.2-201ENST00000401679 213 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL591704.1-201ENST00000432574 275 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 MTCO2P25-201ENST00000447065 681 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AP000542.1-201ENST00000448473 371 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL590365.1-201ENST00000450788 243 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC003071.1-201ENST00000451219 789 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 RPS3AP22-201ENST00000488297 769 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-64P-201ENST00000517119 105 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-1028P-201ENST00000517164 93 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-902P-201ENST00000517212 91 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AP003392.2-201ENST00000527269 208 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 SUB1P4-201ENST00000566062 339 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC099785.1-201ENST00000605697 437 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AP002802.2-201ENST00000605877 235 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AC097468.3-201ENST00000607956 456 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL354696.1-201ENST00000614652 497 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 uc_338.15-201ENST00000615470 191 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms