Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL513478.4-201ENST00000641636 310 ntBASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCFC2Q9Y5Z7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 RNA5SP267-201ENST00000364893 126 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.352-201ENST00000365439 102 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.458-201ENST00000384240 102 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.539-201ENST00000384635 107 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD115-46-201ENST00000390982 71 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 HDGFP1-201ENST00000405943 252 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 RPL21P38-201ENST00000418090 167 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 MTND3P9-201ENST00000429526 346 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AL627311.1-201ENST00000431514 115 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CYCSP32-201ENST00000440548 321 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD105B-201ENST00000458770 79 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 RN7SL585P-201ENST00000470538 280 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 RPL23AP45-201ENST00000476406 468 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 IGKV2-38-201ENST00000517443 247 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AL442163.3-201ENST00000554110 156 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC104581.2-201ENST00000572227 430 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC005000.2-201ENST00000605468 310 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 AC018529.3-201ENST00000624212 2254 ntBASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HCFC2Q9Y5Z7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
HCFC2Q9Y5Z7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HCFC2Q9Y5Z7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 RNU6-827P-201ENST00000365553 106 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MRPL35P1-201ENST00000404272 572 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 RNA5SP494-201ENST00000410653 129 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MTND5P15-201ENST00000434246 349 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 HLA-N-201ENST00000437516 135 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 BX510359.1-201ENST00000456973 237 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 RPL7P5-201ENST00000471472 736 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MED28P2-201ENST00000475771 317 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 RNU4-71P-201ENST00000516258 113 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC069240.1-201ENST00000548774 375 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AMZ2P1-203ENST00000565833 850 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AC005046.1-201ENST00000608515 625 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MIR3651-201ENST00000630427 90 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 AL359693.1-201ENST00000614959 2407 ntBASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCFC2Q9Y5Z7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 AL391987.6-201ENST00000305671 199 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 Y_RNA.29-201ENST00000362570 113 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 RNU6-338P-201ENST00000383888 105 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 RNU2-14P-201ENST00000411053 191 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 Z85995.1-201ENST00000415547 335 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 CYCSP4-201ENST00000429682 331 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 BX679664.1-201ENST00000434429 253 ntBASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCFC2Q9Y5Z7 RPS29P27-201ENST00000463711 170 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms