Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HRH3Q9Y5N1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HRH3Q9Y5N1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.54□□□□□ -1.68
HRH3Q9Y5N1 AC073073.2-201ENST00000609827 2578 ntBASIC4.54□□□□□ -1.68
HRH3Q9Y5N1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.54□□□□□ -1.68
HRH3Q9Y5N1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC007496.3-201ENST00000624987 3443 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 CUL1P1-201ENST00000509510 2425 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 Y_RNA.329-201ENST00000365209 107 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RNU4-11P-201ENST00000365287 132 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNORD116-14-201ENST00000383894 92 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNORD116-17-201ENST00000383929 92 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNORD116-15-201ENST00000384445 92 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNORD116-19-201ENST00000384729 92 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 MIR888-201ENST00000401186 77 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL357515.1-201ENST00000402967 542 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RNU6-1199P-201ENST00000411249 104 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 NDUFS5P4-201ENST00000412983 318 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RPL21P66-201ENST00000426566 466 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 COX6CP13-201ENST00000428703 226 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 HMGB1P37-201ENST00000439613 609 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL356535.1-201ENST00000440335 398 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC000111.2-201ENST00000448200 210 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RPL7AP28-201ENST00000464513 571 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC007215.1-201ENST00000464893 276 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 UQCRHP4-201ENST00000471686 272 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 RN7SL319P-201ENST00000480656 221 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNORA31.23-201ENST00000517219 133 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC100767.1-201ENST00000528178 123 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC009163.5-201ENST00000575421 637 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 IPO5P1-202ENST00000600039 287 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 SNRPGP20-201ENST00000604477 205 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AL591034.3-201ENST00000605511 685 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 TLK1P1-201ENST00000456760 2440 ntBASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.53□□□□□ -1.68
HRH3Q9Y5N1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNU1-62P-201ENST00000362599 164 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.71-201ENST00000362892 104 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNU6-884P-201ENST00000363889 107 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNA5SP515-201ENST00000364570 118 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNU6-818P-201ENST00000364837 108 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNU6-80P-201ENST00000384195 107 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MIR192-201ENST00000384915 110 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MIR493-201ENST00000385254 89 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNA5SP390-201ENST00000410191 113 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 ELOCP21-201ENST00000412558 336 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC019205.3-201ENST00000424573 156 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MTND4LP9-201ENST00000427694 174 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AP000705.1-201ENST00000454567 350 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RNU6-1211P-201ENST00000459179 105 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.637-201ENST00000459424 114 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 RN7SL441P-201ENST00000492388 296 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC115990.1-201ENST00000526957 301 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC209154.1-201ENST00000582156 337 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AC012468.1-201ENST00000604888 430 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 AP000346.3-201ENST00000622821 210 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HRH3Q9Y5N1 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms