Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC104260.1-201ENST00000616660 539 ntBASIC3□□□□□ -1.93
CLDN16Q9Y5I7 AC022306.2-201ENST00000617563 647 ntBASIC3□□□□□ -1.93
CLDN16Q9Y5I7 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
CLDN16Q9Y5I7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLDN16Q9Y5I7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN16Q9Y5I7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN16Q9Y5I7 AC010680.1-201ENST00000590024 3590 ntBASIC3□□□□□ -1.93
CLDN16Q9Y5I7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC110491.1-201ENST00000562191 2010 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 Z98749.2-208ENST00000381646 500 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 SNORA9-201ENST00000384215 133 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-1009P-201ENST00000390996 107 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 MTND3P8-201ENST00000412909 339 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AL365400.1-201ENST00000431854 640 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RPS15AP5-201ENST00000436276 388 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RNU7-138P-201ENST00000459479 64 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RPS27P29-201ENST00000463110 252 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC026801.1-201ENST00000497178 464 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC091951.2-201ENST00000500762 203 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 Y_RNA.687-201ENST00000516558 91 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-256P-201ENST00000516747 97 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC104027.1-201ENST00000521887 300 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC010653.1-201ENST00000571108 881 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 MIR4742-201ENST00000581069 85 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC008121.1-201ENST00000603244 268 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 AC073346.2-201ENST00000624724 2058 ntBASIC2.99□□□□□ -1.93
CLDN16Q9Y5I7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU1-75P-201ENST00000347264 129 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-214P-201ENST00000384130 107 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AL122016.1-201ENST00000403365 367 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RN7SKP32-201ENST00000410167 303 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 VN1R36P-201ENST00000414936 291 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 MTCO3P46-201ENST00000425787 232 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC093151.1-201ENST00000427711 313 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC098831.1-201ENST00000440661 216 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AL031274.1-201ENST00000450334 232 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU7-66P-201ENST00000459469 62 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-329P-201ENST00000459618 107 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RPL27AP5-201ENST00000469428 449 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC113155.1-201ENST00000511141 769 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-581P-201ENST00000516214 105 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-875P-201ENST00000516488 106 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AL121821.2-201ENST00000556081 394 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC021739.1-201ENST00000559631 174 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 MIR5195-201ENST00000583555 115 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC012493.2-201ENST00000595083 291 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC078899.3-201ENST00000599065 212 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 ATP5A1P2-202ENST00000616464 443 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN16Q9Y5I7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-858P-201ENST00000362436 107 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RNA5SP374-201ENST00000362939 125 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-72P-201ENST00000384285 79 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 U3.37-201ENST00000408528 213 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AC093019.1-201ENST00000443135 252 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 HMGN2P10-201ENST00000448085 265 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AC125238.1-201ENST00000448842 249 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AC092001.1-201ENST00000453012 261 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 HMGN1P18-201ENST00000457642 277 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
CLDN16Q9Y5I7 RNU6-864P-201ENST00000516256 108 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms