Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 ZFRP1-201ENST00000457579 2970 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 SNORA31-201ENST00000362607 130 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1285P-201ENST00000363480 105 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-793P-201ENST00000384233 104 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AL512633.1-201ENST00000399931 655 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC140479.3-201ENST00000418944 1126 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC019205.3-201ENST00000424573 156 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 snoU13.20-201ENST00000459180 104 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC007215.1-201ENST00000464893 276 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RPL30P12-201ENST00000474666 353 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SL214P-201ENST00000487317 265 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC011602.1-201ENST00000546484 331 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC133555.2-201ENST00000550213 292 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC021739.1-201ENST00000559631 174 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR5699-201ENST00000578903 90 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC005086.4-201ENST00000623065 213 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AL355480.1-201ENST00000629041 99 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 A2MP1-204ENST00000566278 4130 ntBASIC4.6□□□□□ -1.67
PCDHGA11Q9Y5H2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-211P-201ENST00000384047 107 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1117P-201ENST00000384525 104 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 MIR195-201ENST00000385194 87 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AL357139.1-201ENST00000407792 426 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 U3.39-201ENST00000408569 239 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 BMS1P22-201ENST00000414726 313 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 HMGB1P37-201ENST00000439613 609 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC009237.7-201ENST00000447357 229 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AP000705.1-201ENST00000454567 350 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AL121594.1-201ENST00000475906 575 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SL177P-201ENST00000476596 299 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RN7SL817P-201ENST00000480777 288 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-191P-201ENST00000516295 94 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 SCARNA21.2-201ENST00000516600 166 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AP004242.1-201ENST00000533701 349 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC093249.4-201ENST00000564755 259 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC090897.2-201ENST00000581715 130 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 FAM27B-201ENST00000610601 213 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 AC004467.1-201ENST00000615678 330 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 snoU18.1-201ENST00000629629 71 ntBASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDHGA11Q9Y5H2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
PCDHGA11Q9Y5H2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA11Q9Y5H2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR708-201ENST00000390708 88 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.580-201ENST00000391004 95 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 U3.30-201ENST00000391308 210 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 RPL21P17-201ENST00000397467 475 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 SPTLC1P2-201ENST00000407089 121 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 SNORA11B-201ENST00000408175 129 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 SCARNA10-201ENST00000459255 330 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AP000873.1-201ENST00000463987 400 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 OR7E18P-201ENST00000592589 702 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC091979.2-201ENST00000607514 214 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC100827.5-201ENST00000615883 426 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC068870.2-201ENST00000620635 389 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC140113.4-201ENST00000622087 222 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR3199-2-201ENST00000636243 86 ntBASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 AC002543.1-201ENST00000299783 1954 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms