Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RPS29P2-201ENST00000479278 136 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC113155.1-201ENST00000511141 769 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC007823.1-201ENST00000569932 1566 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 HSPE1P7-201ENST00000604681 321 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC123912.5-201ENST00000605470 343 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AL080274.1-201ENST00000605565 220 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC008962.1-201ENST00000605729 304 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 PISRT1.1-201ENST00000616930 107 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AP003355.3-201ENST00000623465 114 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 AC073308.1-201ENST00000623696 305 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 SNORD73A-201ENST00000386062 65 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 RNA5SP31-201ENST00000411144 127 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 RHEBP3-201ENST00000411920 351 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC099548.1-201ENST00000421443 426 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 RPS15AP10-201ENST00000432472 382 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 BTF3P15-201ENST00000455606 336 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.711-201ENST00000516993 102 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC104576.1-201ENST00000524225 88 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 H3F3AP1-201ENST00000559984 334 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC019193.3-201ENST00000609144 554 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AL591516.1-201ENST00000611326 274 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AL161423.1-201ENST00000613700 262 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 AC068831.7-201ENST00000616954 363 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB1Q9Y5F3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-270P-201ENST00000364131 105 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 MIR128-1-201ENST00000384921 82 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 U3.37-201ENST00000408528 213 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AC093151.1-201ENST00000427711 313 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RPL26P9-201ENST00000457466 433 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 SNORD105B-201ENST00000458770 79 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RNU7-152P-201ENST00000458982 64 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RPL21P10-201ENST00000463521 490 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RPL23AP45-201ENST00000476406 468 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AL163540.1-201ENST00000485382 386 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RPL7P47-201ENST00000497299 556 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 MIR4738-201ENST00000579134 87 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AL157817.1-201ENST00000614264 790 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 AC244517.12-201ENST00000623581 663 ntBASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB1Q9Y5F3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-72P-201ENST00000384285 79 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AL030996.1-201ENST00000411430 235 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB1Q9Y5F3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms