Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 COX6CP6-201ENST00000490840 228 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC117525.1-201ENST00000515228 503 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC087897.1-201ENST00000550134 156 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AL109620.1-201ENST00000618738 1197 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 AC017037.3-201ENST00000625016 472 ntBASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
UBE2D4Q9Y2X8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 RNY1P4-201ENST00000384595 115 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 RNU2-15P-201ENST00000410692 191 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 MTCO3P5-201ENST00000433620 714 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AL353706.1-201ENST00000436728 494 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 MTND4LP16-201ENST00000440828 295 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 MTND5P8-201ENST00000449817 1083 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 MTND1P16-201ENST00000465177 898 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AC092991.1-201ENST00000477176 376 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 RPL26P26-201ENST00000480251 434 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 PTP4A1P4-201ENST00000512479 322 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 RN7SKP49-201ENST00000516675 260 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AC090142.3-201ENST00000519012 385 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AL121821.2-201ENST00000556081 394 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 NDUFA8P1-201ENST00000605525 367 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 LINC00216-201ENST00000623548 1126 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AP003400.6-201ENST00000624698 740 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AC009950.2-201ENST00000636548 183 ntBASIC0.22□□□□□ -2.37
UBE2D4Q9Y2X8 AC023934.1-201ENST00000574529 2389 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 SNORD114-24-201ENST00000365029 72 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 Y_RNA.354-201ENST00000365448 111 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 RPL23AP32-201ENST00000395315 459 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 MIR936-201ENST00000401264 98 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AL139397.2-201ENST00000404529 772 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 MIR1302-8-201ENST00000408342 128 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AC127391.1-201ENST00000411737 98 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 LINC01347-201ENST00000417964 355 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 HIGD1AP6-201ENST00000521833 279 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AP003066.2-201ENST00000529375 555 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AL512310.8-201ENST00000550183 120 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 ROCK1P1-201ENST00000573767 549 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AC012213.3-201ENST00000577199 777 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 AC004808.1-201ENST00000627671 721 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 MTND1P37-201ENST00000636562 264 ntBASIC0.21□□□□□ -2.38
UBE2D4Q9Y2X8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 U3.8-201ENST00000363675 217 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-110P-201ENST00000384508 104 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 MIR19B1-201ENST00000384829 87 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 RNU2-33P-201ENST00000410344 192 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 PTGES3P4-201ENST00000426243 356 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 RPL23AP35-201ENST00000451906 501 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC013267.1-201ENST00000458227 267 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC092436.3-201ENST00000511788 257 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC074344.1-201ENST00000512823 224 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC006518.2-201ENST00000542513 940 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 MIR4711-201ENST00000578274 70 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC011712.1-201ENST00000588959 234 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 Z82243.1-201ENST00000609432 473 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC104465.1-201ENST00000611365 139 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC090970.3-201ENST00000612566 866 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 ELL2P3-201ENST00000457883 1602 ntBASIC0.2□□□□□ -2.38
UBE2D4Q9Y2X8 GDI2P1-201ENST00000429312 1336 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 RNA5SP361-201ENST00000362686 118 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-611P-201ENST00000384276 104 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 RNU2-48P-201ENST00000410694 191 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 OR2AQ1P-201ENST00000451972 200 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AL441985.1-201ENST00000457727 251 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 RN7SKP88-201ENST00000516847 250 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 ZNF705CP-201ENST00000530515 889 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC079598.5-201ENST00000547460 117 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AL132857.1-201ENST00000555180 708 ntBASIC0.19□□□□□ -2.38
UBE2D4Q9Y2X8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms