Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZNRF3Q9ULT6 AC007390.2-201ENST00000606229 3803 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 DEFB109C-201ENST00000382575 264 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 DEFB109B-201ENST00000382656 264 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-1156P-201ENST00000410365 100 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 HMGB3P2-201ENST00000411913 584 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 RPL23AP94-201ENST00000512518 302 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 PHBP14-201ENST00000512887 367 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.687-201ENST00000516558 91 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 RNU4-77P-201ENST00000516692 156 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AP005902.1-201ENST00000521358 186 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 MIR4503-201ENST00000582187 83 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC104695.3-201ENST00000604052 296 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AL137843.1-201ENST00000605078 385 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AC091812.1-201ENST00000432235 1948 ntBASIC4.33□□□□□ -1.72
ZNRF3Q9ULT6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.47-201ENST00000362697 108 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.452-201ENST00000384202 108 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.500-201ENST00000384466 111 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 MIR625-201ENST00000385047 85 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.645-201ENST00000391229 102 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 U3.26-201ENST00000391236 204 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 AL138885.1-201ENST00000405921 675 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 RNA5SP104-201ENST00000410989 118 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 NUP35P1-201ENST00000422734 947 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 AC092047.1-201ENST00000424997 240 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 FTH1P6-201ENST00000430768 320 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 AL353752.1-201ENST00000454946 260 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-377P-201ENST00000515965 102 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 RNU2-58P-201ENST00000516403 183 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-1282P-201ENST00000516735 96 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 MIR4325-201ENST00000583049 90 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 7SK.7-201ENST00000603504 247 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 MIR8076-201ENST00000611401 83 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 HMGB1P24-202ENST00000615653 685 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 U4.6-201ENST00000621618 127 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 FAM35BP-202ENST00000497389 3337 ntBASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNRF3Q9ULT6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 ZNF299P-201ENST00000406845 1804 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.533-201ENST00000384596 114 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 UBA52P6-201ENST00000399822 382 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 RNA5SP306-201ENST00000411087 107 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 EIF4EP2-201ENST00000422816 654 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-635P-201ENST00000516651 102 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC010186.2-204ENST00000537668 439 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 MIR3690-201ENST00000580266 75 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC006006.1-201ENST00000603082 144 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC138305.3-201ENST00000624988 240 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 AC008669.1-201ENST00000565823 2178 ntBASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNRF3Q9ULT6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 LINC02471-203ENST00000641941 4752 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 MTND5P9-201ENST00000503854 1755 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC022336.2-201ENST00000568966 2538 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-450P-201ENST00000364654 107 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.485-201ENST00000384395 102 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 MIR568-201ENST00000385036 95 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 HLFP1-201ENST00000402375 499 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 RNA5SP39-201ENST00000411245 120 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC112492.4-201ENST00000456549 352 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 snoU109.2-201ENST00000459316 135 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms