Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 AC026801.1-201ENST00000497178 464 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC096745.1-201ENST00000509945 370 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC104576.1-201ENST00000524225 88 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 CASP1P1-201ENST00000526345 212 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 MIR5690-201ENST00000583739 73 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 AC123912.5-201ENST00000605470 343 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.812-201ENST00000610788 101 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.784-201ENST00000613803 101 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.787-201ENST00000616522 101 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.780-201ENST00000617336 101 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.801-201ENST00000619005 101 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
AMFRQ9UKV5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AMFRQ9UKV5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RNU6-1329P-201ENST00000365664 107 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 SNORA48.7-201ENST00000391302 135 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RNU2-68P-201ENST00000410878 191 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RPL21P129-201ENST00000491732 478 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC116337.1-201ENST00000509680 687 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC093303.1-201ENST00000514549 295 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 RNU6-1016P-201ENST00000516689 94 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 HMGB1P14-201ENST00000557424 591 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 OR1M4P-201ENST00000589199 287 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC007938.3-201ENST00000604965 623 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AL080274.1-201ENST00000605565 220 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 U3.45-201ENST00000607547 219 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC098657.3-201ENST00000620434 263 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 AC134503.1-201ENST00000633048 54 ntBASIC3.32□□□□□ -1.88
AMFRQ9UKV5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
AMFRQ9UKV5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 KPNA2P1-201ENST00000458289 1591 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.187-201ENST00000363918 113 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 RNU6-306P-201ENST00000384617 107 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 RNU6-310P-201ENST00000384655 107 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 ATG3P1-201ENST00000419507 911 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 RNU7-187P-201ENST00000458985 68 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.653-201ENST00000459091 95 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AC026782.1-201ENST00000512952 449 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 MIR4474-201ENST00000579189 78 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 MIR4429-201ENST00000580105 73 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AL110115.1-201ENST00000614396 364 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AC244517.12-201ENST00000623581 663 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AL669831.3-213ENST00000636676 183 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
AMFRQ9UKV5 AL359693.1-201ENST00000614959 2407 ntBASIC3.31□□□□□ -1.88
AMFRQ9UKV5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMFRQ9UKV5 SNORD62.1-201ENST00000362541 86 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.128-201ENST00000363391 112 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.146-201ENST00000363549 102 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 SNORD14B-201ENST00000364533 90 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 RNU6-593P-201ENST00000364716 112 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
AMFRQ9UKV5 RNU6-140P-201ENST00000384566 108 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 SNORA75.4-201ENST00000391278 119 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 RPL5P18-201ENST00000406671 891 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 MIR548P-201ENST00000408336 84 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.646-201ENST00000410980 101 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 Y_RNA.623-201ENST00000411128 95 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
AMFRQ9UKV5 PGBD4P6-201ENST00000421501 610 ntBASIC3.3□□□□□ -1.88
AMFRQ9UKV5 UBE2V1P4-201ENST00000425374 344 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms