Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 Y_RNA.76-201ENST00000362931 109 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 RNU6-187P-201ENST00000384139 106 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 RNU6-140P-201ENST00000384566 108 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 MTCO2P33-201ENST00000402100 465 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 SNORA11F-201ENST00000408237 128 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 RNU5A-5P-201ENST00000411054 116 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 EIF1P2-201ENST00000428233 350 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 AC004975.1-201ENST00000428733 208 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 CYCSP32-201ENST00000440548 321 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 AL451050.1-201ENST00000450126 415 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 RN7SKP21-201ENST00000516503 220 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 RNU2-31P-201ENST00000516954 155 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 AC011944.2-201ENST00000624440 683 ntBASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SALL4Q9UJQ4 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 MARK2P15-201ENST00000432204 2186 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 ZNF826P-207ENST00000622273 1910 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 SNORA7.2-201ENST00000364446 145 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RNU6-142P-201ENST00000384019 107 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RPS4XP3-201ENST00000398541 413 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AC092047.1-201ENST00000424997 240 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AC005002.2-201ENST00000438228 269 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 COX6CP14-201ENST00000469580 174 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RN7SL303P-201ENST00000469773 251 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RPL30P1-201ENST00000488676 339 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RNU6-703P-201ENST00000516946 107 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RNU6-255P-201ENST00000516957 105 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 CYCSP39-201ENST00000565821 309 ntBASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SALL4Q9UJQ4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SALL4Q9UJQ4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.46□□□□□ -1.69
SALL4Q9UJQ4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC018555.1-201ENST00000567548 1980 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNA5SP513-201ENST00000364648 118 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNU6-318P-201ENST00000384283 103 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 Y_RNA.504-201ENST00000384481 104 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNU6-21P-201ENST00000384710 107 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNU1-139P-201ENST00000391307 165 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 SNORD12B-201ENST00000410433 91 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 Y_RNA.626-201ENST00000411288 95 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RPS29P17-201ENST00000430795 166 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC011998.1-201ENST00000433403 117 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 MTATP6P7-201ENST00000453315 681 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AL645939.1-201ENST00000453429 797 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RPL23AP81-201ENST00000455252 467 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC087477.1-201ENST00000465747 340 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AP000870.1-201ENST00000472927 406 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 MIR3939-201ENST00000582614 106 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 MIR3138-201ENST00000585238 82 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AL162424.1-201ENST00000602325 221 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 uc_338.13-201ENST00000618243 179 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC024581.2-201ENST00000619986 252 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 AC015813.6-201ENST00000624409 5808 ntBASIC4.46□□□□□ -1.7
SALL4Q9UJQ4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 RNU6-658P-201ENST00000384606 106 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 Y_RNA.569-201ENST00000384749 103 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 MIR325-201ENST00000385260 98 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 SNORA11-201ENST00000408789 128 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 COX6CP10-201ENST00000416832 224 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 AC243964.1-201ENST00000441814 261 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.45□□□□□ -1.7
SALL4Q9UJQ4 RN7SL691P-201ENST00000494487 301 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms