Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AL031601.2-202ENST00000622650 282 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AL160394.1-201ENST00000624765 724 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AP003400.5-201ENST00000624827 617 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 RNU6-1303P-201ENST00000364841 107 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 RPS4XP7-201ENST00000406274 780 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 RNA5SP21-201ENST00000410917 96 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 PGBD4P6-201ENST00000421501 610 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 PRPS1P1-201ENST00000445305 876 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 TBCAP3-201ENST00000512475 312 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 RNU6-1281P-201ENST00000516223 105 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 ACA59.2-201ENST00000517061 156 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MTND4P7-201ENST00000523876 130 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC004486.1-201ENST00000546846 233 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC136619.2-201ENST00000563361 631 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR3670-2-201ENST00000582974 65 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR4635-201ENST00000583759 79 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR3670-1-201ENST00000584160 65 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR3670-3-201ENST00000584855 65 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR4424-201ENST00000585257 86 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 MIR3670-4-201ENST00000612260 65 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC011890.2-201ENST00000613393 294 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC010378.1-201ENST00000619270 362 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 AC004520.1-201ENST00000608362 1413 ntBASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LIMA1Q9UHB6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 RNU6-483P-201ENST00000384088 108 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AL592114.1-201ENST00000403842 483 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 CCDC34P1-201ENST00000507441 517 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 RNA5SP401-201ENST00000515920 127 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 RNU4-29P-201ENST00000515943 174 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC090136.1-201ENST00000520009 240 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 MTCO3P23-201ENST00000561363 289 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 MIR5195-201ENST00000583555 115 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 U4.5-201ENST00000617137 123 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 SCARNA4-202ENST00000625402 129 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 AC138915.1-201ENST00000565427 1685 ntBASIC2.91□□□□□ -1.94
LIMA1Q9UHB6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
LIMA1Q9UHB6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
LIMA1Q9UHB6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.9□□□□□ -1.94
LIMA1Q9UHB6 AC073346.2-201ENST00000624724 2058 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 SNORA68.1-201ENST00000364537 132 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 Y_RNA.399-201ENST00000383955 105 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 MIR147B-201ENST00000390185 80 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 RNA5SP210-201ENST00000391034 120 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 CIR1P3-201ENST00000405137 479 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 FTH1P15-201ENST00000406984 280 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 BTF3P7-201ENST00000407097 488 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 RAP1BP3-201ENST00000407180 549 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 AL513477.1-202ENST00000417061 214 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 EIF1P1-201ENST00000421436 341 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 SEPT14P3-201ENST00000439401 183 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 CALM1P1-201ENST00000442082 433 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 AL732372.2-207ENST00000445840 183 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 SEPT14P2-201ENST00000453405 183 ntBASIC2.9□□□□□ -1.95
LIMA1Q9UHB6 SEPT14P4-201ENST00000513445 186 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms