Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CPSF2Q9P2I0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CPSF2Q9P2I0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU6-858P-201ENST00000362436 107 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 Y_RNA.194-201ENST00000363985 102 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU4-40P-201ENST00000364351 143 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU6-259P-201ENST00000383999 107 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AL133475.1-201ENST00000404414 305 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNU2-29P-201ENST00000410423 189 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 CYCSP33-201ENST00000414485 327 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 NUP35P1-201ENST00000422734 947 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RPL7P43-201ENST00000478876 753 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC114781.4-201ENST00000513707 639 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC105417.1-201ENST00000514691 285 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 RNA5SP112-201ENST00000515937 99 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 MIR5694-201ENST00000581190 76 ntBASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CPSF2Q9P2I0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
CPSF2Q9P2I0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RNU6-552P-201ENST00000362869 119 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 Y_RNA.381-201ENST00000365666 102 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RNU6-1127P-201ENST00000384580 107 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 SNORA48.5-201ENST00000391143 135 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 MTCYBP8-201ENST00000422855 651 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RPL35AP12-201ENST00000425362 338 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RPS29P26-201ENST00000477483 171 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC074344.1-201ENST00000512823 224 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 SNORA25.11-201ENST00000515935 105 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC121758.2-201ENST00000553271 193 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC074050.1-201ENST00000563247 211 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AGGF1P4-201ENST00000568249 801 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC105245.1-201ENST00000581934 244 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC104073.3-201ENST00000610942 955 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 CR381653.2-201ENST00000624041 768 ntBASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.71□□□□□ -1.98
CPSF2Q9P2I0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU4-75P-201ENST00000364621 146 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU6-517P-201ENST00000384362 110 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU6-1158P-201ENST00000391167 107 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU6-903P-201ENST00000391270 109 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 BTF3P7-201ENST00000407097 488 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 BX276092.3-201ENST00000424182 230 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RPL36AP48-201ENST00000485521 314 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 SMURF2P1-201ENST00000514992 481 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 AC010186.2-204ENST00000537668 439 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 BNIP3P22-201ENST00000593399 556 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 BNIP3P30-201ENST00000601184 574 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RNU6-91P-201ENST00000607774 107 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 MIR8057-201ENST00000620957 69 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 AC244517.12-201ENST00000623581 663 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 Z75746.1-201ENST00000440243 2080 ntBASIC2.7□□□□□ -1.98
CPSF2Q9P2I0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 RNU6-996P-201ENST00000365438 107 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 Y_RNA.436-201ENST00000384097 102 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 SNORA16.2-201ENST00000390991 127 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 RAP1BP3-201ENST00000407180 549 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 TOMM20P4-201ENST00000427861 435 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 IFNA11P-201ENST00000446352 526 ntBASIC2.69□□□□□ -1.98
CPSF2Q9P2I0 AC073415.1-201ENST00000449240 153 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms