Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 USP9YP17-201ENST00000444617 696 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 RNU4-5P-201ENST00000607255 135 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC130454.1-201ENST00000622948 401 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 RNU4-48P-201ENST00000365559 182 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 MIR518A1-201ENST00000385068 85 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 RPS26P42-201ENST00000413485 326 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AL049874.1-201ENST00000489560 388 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC147055.4-201ENST00000504399 745 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC012435.1-202ENST00000568772 240 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 AC095031.1-201ENST00000623685 672 ntBASIC-0.04□□□□□ -2.42
CHD7Q9P2D1 SNORD114-3-201ENST00000364969 75 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 RNU6-748P-201ENST00000384648 107 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AL109913.1-201ENST00000421173 514 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 HMGB1P22-201ENST00000505315 124 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 SNORA68.3-201ENST00000515906 83 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AC092474.3-201ENST00000603022 568 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AP001596.2-201ENST00000608410 312 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AC004852.3-201ENST00000614131 326 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 SNORA25.3-201ENST00000363205 127 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 MIR605-201ENST00000385078 83 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 HMGN2P39-201ENST00000398005 273 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 snoU13.25-201ENST00000458945 104 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 RPL22P13-201ENST00000493291 347 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AC004923.2-201ENST00000529649 369 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 AP003034.1-201ENST00000534621 422 ntBASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.05□□□□□ -2.42
CHD7Q9P2D1 RNY4P6-201ENST00000363667 96 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RNA5SP205-201ENST00000364653 136 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 MIR506-201ENST00000384998 124 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RPL22P18-201ENST00000417197 377 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 MTCO3P45-201ENST00000443036 613 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RPL7P43-201ENST00000478876 753 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 SNRPGP16-201ENST00000533275 226 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AL356432.3-201ENST00000568952 465 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AL355297.3-201ENST00000604082 446 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AL592221.1-201ENST00000605266 382 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 PNRC2P1-201ENST00000423940 420 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 PTGES3P4-201ENST00000426243 356 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 OR51AB1P-201ENST00000429046 620 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 CETN4P-201ENST00000432407 469 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AC016256.1-201ENST00000547971 354 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AC136619.2-201ENST00000563361 631 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AP003399.1-201ENST00000637534 361 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RNU4-12P-201ENST00000365233 139 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 HMGN2P34-201ENST00000437647 269 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 RN7SKP12-201ENST00000516275 143 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AC021739.1-201ENST00000559631 174 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
CHD7Q9P2D1 AL513185.3-201ENST00000433335 1300 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AL079343.1-201ENST00000572358 1771 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 Z75746.1-201ENST00000440243 2080 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 snoU13.4-201ENST00000458916 104 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 HMGB1P35-201ENST00000503360 598 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 RN7SKP5-201ENST00000517045 272 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 IGJP1-201ENST00000522682 475 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AC093838.1-201ENST00000613014 469 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 MIR8074-201ENST00000615081 81 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AC005832.2-201ENST00000538921 1430 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 MICF-203ENST00000432679 129 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 AL159152.1-201ENST00000635019 2587 ntBASIC-0.07□□□□□ -2.42
CHD7Q9P2D1 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 AC068790.6-201ENST00000602558 258 ntBASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 AC090625.1-201ENST00000357130 210 ntBASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.08□□□□□ -2.42
CHD7Q9P2D1 RPL18AP17-201ENST00000455326 198 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms