Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 RSU1P2-202ENST00000437884 485 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC093809.1-201ENST00000509155 340 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC107953.1-201ENST00000522216 297 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC008015.1-201ENST00000555505 465 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC008269.2-201ENST00000561915 1105 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC109446.2-201ENST00000567872 497 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC097478.2-201ENST00000610572 514 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 uc_338.12-201ENST00000616344 181 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AC009233.1-201ENST00000616477 371 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 AP002782.1-201ENST00000623107 614 ntBASIC1.15□□□□□ -2.23
CCDC88CQ9P219 MTND5P35-201ENST00000557537 1720 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 SNORA23-201ENST00000365128 182 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 MIR218-1-201ENST00000384999 110 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 MTCO1P17-201ENST00000411522 491 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 MTATP6P20-201ENST00000414147 562 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC88CQ9P219 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.14□□□□□ -2.23
CCDC88CQ9P219 MTND6P13-201ENST00000443510 523 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC021146.8-201ENST00000507455 733 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 ATP5EP1-201ENST00000510257 156 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 CBX3P7-201ENST00000532876 502 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC012213.3-201ENST00000577199 777 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 MIR4713-201ENST00000582691 75 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 ELOCP5-201ENST00000604924 333 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC126118.1-201ENST00000607744 628 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AC131235.4-201ENST00000609288 620 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 AL773524.1-201ENST00000614065 229 ntBASIC1.14□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.116-201ENST00000363292 103 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-529P-201ENST00000363383 104 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-723P-201ENST00000383973 107 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU11-3P-201ENST00000391111 133 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL359634.1-202ENST00000404721 284 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 ISCA1P1-201ENST00000426679 387 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 SDAD1P3-201ENST00000427380 333 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL358794.1-201ENST00000445689 381 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC068781.1-201ENST00000488231 618 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 NDUFA5P6-201ENST00000542110 379 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 MIR4293-201ENST00000584305 78 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC090186.1-201ENST00000605991 572 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-1167P-201ENST00000363227 94 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 MIR29C-201ENST00000385231 88 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNA5SP212-201ENST00000391223 107 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL158823.1-201ENST00000418441 478 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC093106.2-201ENST00000428212 385 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 HSPE1P24-201ENST00000450782 238 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC023194.1-201ENST00000493084 308 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC104629.1-201ENST00000494226 508 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-390P-201ENST00000516259 103 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-970P-201ENST00000516312 107 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 RNU6-143P-201ENST00000516942 93 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL158050.2-201ENST00000605336 568 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AC091965.5-201ENST00000624785 342 ntBASIC1.13□□□□□ -2.23
CCDC88CQ9P219 AL161722.3-201ENST00000605789 2983 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 ZNF29P-201ENST00000225587 168 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU6-777P-201ENST00000364265 104 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU6-898P-201ENST00000365627 104 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 SNORD116.1-201ENST00000365628 92 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 Y_RNA.508-201ENST00000384502 114 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 MIR518D-201ENST00000385014 87 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC096920.1-201ENST00000423991 241 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RPS15AP9-201ENST00000439856 381 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 CYP2C59P-201ENST00000457790 269 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC107032.1-201ENST00000485945 480 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC018437.1-201ENST00000492214 406 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC016550.1-201ENST00000505348 785 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU6-276P-201ENST00000516114 96 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU6-150P-201ENST00000516237 95 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 RNU6-703P-201ENST00000516946 107 ntBASIC1.12□□□□□ -2.23
CCDC88CQ9P219 AC091163.3-201ENST00000518269 1144 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms