Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SNORD3E-201ENST00000362899 217 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RNU4-66P-201ENST00000365199 138 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RNU6-715P-201ENST00000365204 103 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SNORA75B-201ENST00000384053 137 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC099548.1-201ENST00000421443 426 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SNRPEP9-201ENST00000436794 238 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RPS15AP27-201ENST00000449183 343 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 MTND3P16-201ENST00000452205 344 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SCARNA18-201ENST00000459004 134 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 RPS29P25-201ENST00000481709 171 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AP003122.3-201ENST00000526316 255 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC084851.1-201ENST00000529105 249 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AL138976.2-201ENST00000563989 694 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 DISC2.1-201ENST00000612827 205 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AL138880.2-201ENST00000616214 239 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 OR4G1P-203ENST00000641984 1631 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
NDE1Q9NXR1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NDE1Q9NXR1 MTND4P14-201ENST00000435799 1354 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU6-38P-201ENST00000384085 107 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU6-217P-201ENST00000384164 104 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RPS4XP7-201ENST00000406274 780 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU2-68P-201ENST00000410878 191 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RPL21P90-201ENST00000415692 466 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AL669831.1-202ENST00000428504 417 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AL591704.1-201ENST00000432574 275 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 GTF2IP13-201ENST00000438487 386 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC011816.1-201ENST00000441346 546 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU6-333P-201ENST00000459117 107 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RPS15AP34-201ENST00000487776 387 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RPS29P20-201ENST00000489592 171 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MTCYBP18-201ENST00000501056 747 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC112206.3-201ENST00000514578 389 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 RNU1-103P-201ENST00000516502 125 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AP000867.2-201ENST00000532468 320 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AL157871.3-201ENST00000557231 293 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MIR4424-201ENST00000585257 86 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 MTND4LP5-201ENST00000605152 292 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AP003400.5-201ENST00000624827 617 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NDE1Q9NXR1 AC093536.2-201ENST00000565257 1406 ntBASIC2.51□□□□□ -2.01
NDE1Q9NXR1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RNU6-884P-201ENST00000363889 107 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RNU6-1035P-201ENST00000384477 107 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 MIR128-1-201ENST00000384921 82 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 SNORA48.2-201ENST00000390926 124 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 SNORD70.1-201ENST00000391007 85 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RNU6-193P-201ENST00000410977 107 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms