Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC096576.1-201ENST00000489014 359 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC008526.1-201ENST00000509149 338 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC117522.2-201ENST00000510049 657 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC074344.1-201ENST00000512823 224 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 PSMA3P-201ENST00000555485 635 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC136619.2-201ENST00000563361 631 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 RN7SKP299-201ENST00000606679 301 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC005046.1-201ENST00000608515 625 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC026585.1-201ENST00000619582 524 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHCHD3Q9NX63 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHCHD3Q9NX63 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 SNORA51.11-201ENST00000384442 131 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 RNU6-851P-201ENST00000384565 107 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 RNVU1-14-201ENST00000384770 164 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AL139039.1-201ENST00000401900 692 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC236972.1-201ENST00000433225 199 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 RPL7P12-201ENST00000446719 750 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC079140.3-201ENST00000511111 550 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 Y_RNA.687-201ENST00000516558 91 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 BNIP3P30-201ENST00000601184 574 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC021646.1-201ENST00000605469 484 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 MIR5739-201ENST00000619803 80 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 AC073534.2-201ENST00000620377 381 ntBASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.52□□□□□ -2.01
CHCHD3Q9NX63 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RNU1-140P-201ENST00000365040 165 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RNU6-517P-201ENST00000384362 110 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 MIR491-201ENST00000384877 84 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 GSTA9P-201ENST00000406231 611 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 SNORD23.1-201ENST00000408212 104 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RNA5SP390-201ENST00000410191 113 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 HMGN2P38-201ENST00000423806 265 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 WARS2P1-201ENST00000429678 537 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AL358934.1-201ENST00000432346 324 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AP000936.2-201ENST00000447151 681 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RPS29P15-201ENST00000458329 171 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RPS3AP17-201ENST00000472594 777 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC090255.1-201ENST00000495779 349 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 SCGB1D5P-201ENST00000515134 247 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 CYCSP26-201ENST00000534107 320 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AL133241.1-201ENST00000556832 487 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AL138976.2-201ENST00000563989 694 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC006362.1-201ENST00000567392 174 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC119751.7-201ENST00000600494 245 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 AC008536.2-201ENST00000607284 349 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 CR381653.2-201ENST00000624041 768 ntBASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHCHD3Q9NX63 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 Y_RNA.296-201ENST00000364930 108 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RNU6-301P-201ENST00000384277 107 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RNU6-1119P-201ENST00000384349 108 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 RNU6-434P-201ENST00000384376 107 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AL138885.1-201ENST00000405921 675 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
CHCHD3Q9NX63 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms