Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MIR892C-201ENST00000516410 77 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP24-201ENST00000516478 95 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 Y_RNA.688-201ENST00000516565 95 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-445P-201ENST00000516949 107 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC135279.1-201ENST00000543493 504 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC027176.1-201ENST00000560204 514 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 MIR4775-201ENST00000581168 75 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL049779.4-201ENST00000604500 156 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 Z84480.1-201ENST00000605131 311 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC005332.10-201ENST00000612725 619 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 SEPT14P19-203ENST00000633205 211 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AL390237.1-201ENST00000404226 1415 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP387-201ENST00000364226 106 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP125-201ENST00000364843 120 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU4-48P-201ENST00000365559 182 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 SNORA75-201ENST00000384158 137 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU6-456P-201ENST00000384493 107 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU6-550P-201ENST00000391057 101 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RPL21P90-201ENST00000415692 466 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC000111.3-201ENST00000433478 193 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AL031659.1-201ENST00000447075 539 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RN7SL636P-201ENST00000497504 294 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC008526.1-201ENST00000509149 338 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC114781.4-201ENST00000513707 639 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU1-86P-201ENST00000516108 154 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNU1-107P-201ENST00000516617 154 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP503-201ENST00000517047 117 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 MTCO2P4-201ENST00000517968 247 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AP002963.1-201ENST00000530590 184 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AL356057.1-201ENST00000533798 831 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 MIR4528-201ENST00000577763 90 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 LARP7P3-201ENST00000579888 337 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RPS15AP11-201ENST00000594193 385 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RMST_4.1-201ENST00000616886 107 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AC009161.2-201ENST00000624626 138 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 MIR3529-201ENST00000637713 78 ntBASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCL28Q9NRJ3 AL365361.1-201ENST00000566942 3481 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 SNORA80A-201ENST00000363922 136 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 SNORA38-201ENST00000363946 132 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 CYCSP48-201ENST00000417124 323 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC003685.2-201ENST00000422795 395 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AL358934.1-201ENST00000432346 324 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AL596276.1-201ENST00000434465 418 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 MTND4P32-201ENST00000437189 1237 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 CALM1P1-201ENST00000442082 433 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 RPL7P12-201ENST00000446719 750 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AL162395.1-201ENST00000457882 422 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 RPS29P15-201ENST00000458329 171 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 RPL31P3-201ENST00000458430 332 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 OR4R1P-201ENST00000529879 463 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AL391840.1-201ENST00000571144 367 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 MIR4446-201ENST00000578505 67 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 AC073539.2-201ENST00000597113 165 ntBASIC1.83□□□□□ -2.12
CCL28Q9NRJ3 BNIP3P30-201ENST00000601184 574 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms