Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 SNORA25.11-201ENST00000515935 105 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 RN7SKP40-201ENST00000517211 242 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC009063.1-201ENST00000563342 702 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC234778.2-201ENST00000566241 354 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC105137.2-201ENST00000569073 466 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC073539.2-201ENST00000597113 165 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC080013.6-201ENST00000606185 215 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC009090.3-201ENST00000616553 565 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 U6.42-201ENST00000618440 107 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 AC080128.1-201ENST00000474389 1917 ntBASIC2.17□□□□□ -2.06
EXOSC3Q9NQT5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 ZNF680P1-201ENST00000436625 1469 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 RNA5SP393-201ENST00000363423 117 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 RNU6-384P-201ENST00000364900 104 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 Y_RNA.381-201ENST00000365666 102 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AL591416.1-201ENST00000404015 867 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 GSTA9P-201ENST00000406231 611 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 FTH1P15-201ENST00000406984 280 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 MTCO3P30-201ENST00000426425 670 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC073464.1-201ENST00000429823 534 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AL118520.1-201ENST00000450770 291 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AL122001.1-201ENST00000457027 370 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC092436.1-201ENST00000506450 503 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 MTND3P25-201ENST00000509243 135 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC008716.1-201ENST00000511084 513 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 RNU1-86P-201ENST00000516108 154 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 RNU1-107P-201ENST00000516617 154 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AP003392.2-201ENST00000527269 208 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 FAM92A1P1-201ENST00000528023 890 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 MIR3199-1-201ENST00000582434 88 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC087683.1-201ENST00000591187 441 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC008121.1-201ENST00000603244 268 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AL391646.1-201ENST00000603860 190 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC245008.1-201ENST00000608123 476 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC097065.2-201ENST00000608159 533 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC103591.3-201ENST00000608684 209 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AP001486.3-201ENST00000615334 372 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
EXOSC3Q9NQT5 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
EXOSC3Q9NQT5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
EXOSC3Q9NQT5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.15□□□□□ -2.06
EXOSC3Q9NQT5 RNU6-858P-201ENST00000362436 107 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-525P-201ENST00000363685 104 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 U3.12-201ENST00000364498 214 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 Y_RNA.582-201ENST00000391023 95 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 CIR1P3-201ENST00000405137 479 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AL627311.1-201ENST00000431514 115 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AL596276.1-201ENST00000434465 418 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 FABP5P14-201ENST00000437273 393 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AL445687.1-201ENST00000439946 251 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 MTND1P18-201ENST00000448191 573 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 MTCO2P18-201ENST00000457151 658 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC079382.1-201ENST00000493346 557 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 RPL37P25-201ENST00000507308 276 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC010493.1-201ENST00000513479 292 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-405P-201ENST00000516637 110 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1178P-201ENST00000516674 107 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC109329.2-201ENST00000519658 482 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 MIR4703-201ENST00000577728 79 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 MIR5692A1-201ENST00000580523 69 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC008752.3-201ENST00000588113 712 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC091805.2-201ENST00000603848 235 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC087045.1-201ENST00000605856 382 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC007684.1-201ENST00000609671 477 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 Z99129.1-201ENST00000612510 255 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 AC093783.1-201ENST00000612976 329 ntBASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
EXOSC3Q9NQT5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-715P-201ENST00000365204 103 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 360.7 ms