Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP003181.2-201ENST00000528941 181 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 MIR4299-201ENST00000577899 72 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 MIR5002-201ENST00000584713 97 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AL136370.1-201ENST00000608166 691 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC135507.2-201ENST00000612443 309 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 uc_338.20-201ENST00000621563 178 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC093648.1-201ENST00000623546 606 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AL157786.1-207ENST00000627771 695 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC099654.13-201ENST00000639774 207 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 CENPCP1-201ENST00000533085 2578 ntBASIC1.4□□□□□ -2.19
SND1-IT1Q9HBX3 AC002543.1-201ENST00000299783 1954 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC131280.1-202ENST00000624067 4211 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RNU5E-5P-201ENST00000365379 116 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-641P-201ENST00000384006 107 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA24.1-201ENST00000384401 135 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA48.2-201ENST00000390926 124 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RPS3AP36-201ENST00000398190 775 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RNU2-40P-201ENST00000410833 196 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 TOMM20P4-201ENST00000427861 435 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL451074.3-201ENST00000437709 472 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL591719.1-201ENST00000444669 744 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL360271.2-201ENST00000447710 161 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 USP9YP12-201ENST00000450481 570 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SNRPFP4-201ENST00000456366 242 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC004924.1-201ENST00000480160 781 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC008413.1-201ENST00000511864 177 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC117532.1-201ENST00000514638 323 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA3.4-201ENST00000515969 96 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RNA5SP356-201ENST00000515972 94 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA43.2-201ENST00000516652 128 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC022878.1-201ENST00000530684 149 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 MIR3908-201ENST00000579798 126 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 MIR4448-201ENST00000584360 86 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC243960.4-201ENST00000600532 288 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AL078605.1-201ENST00000603529 500 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC027449.1-201ENST00000608890 407 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 AC005296.1-201ENST00000616145 209 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 RMST_4.1-201ENST00000616886 107 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 CTSLP2-204ENST00000629029 392 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SND1-IT1Q9HBX3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-384P-201ENST00000364900 104 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-546P-201ENST00000383991 107 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MIR578-201ENST00000384828 96 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AL033519.2-201ENST00000403958 392 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 SUMO2P12-201ENST00000405924 140 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU2-48P-201ENST00000410694 191 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU2-32P-201ENST00000411193 191 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 OR9R1P-201ENST00000412200 877 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 XKRYP1-201ENST00000423438 492 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MTND4P20-201ENST00000424125 869 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC007283.2-201ENST00000424739 197 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 CALM2P2-201ENST00000428512 440 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 XKRYP2-201ENST00000432915 492 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AL118520.1-201ENST00000450770 291 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 snoU109.2-201ENST00000459316 135 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RPL21P99-201ENST00000480369 423 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU4-29P-201ENST00000515943 174 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNA5SP281-201ENST00000516504 135 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-685P-201ENST00000517088 95 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 CYCSP27-201ENST00000527643 293 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC022616.8-201ENST00000533569 253 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 MIR5692A1-201ENST00000580523 69 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 HMGN1P30-201ENST00000589286 268 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 DEFB131E-202ENST00000602581 683 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC138649.3-201ENST00000622154 254 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC007792.1-201ENST00000623023 402 ntBASIC1.38□□□□□ -2.19
SND1-IT1Q9HBX3 AC006386.2-201ENST00000624491 75 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms