Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AL355596.1-201ENST00000565399 3996 ntBASIC3.33□□□□□ -1.88
USP29Q9HBJ7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP29Q9HBJ7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC074085.1-201ENST00000413598 418 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 HMGN2P20-201ENST00000437531 273 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC011005.2-201ENST00000487324 359 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RNU6-1153P-201ENST00000516760 105 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RNA5SP165-201ENST00000517142 115 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC025755.1-201ENST00000521306 278 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RNU6-323P-201ENST00000521915 107 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 MIR4790-201ENST00000577799 79 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC138761.3-201ENST00000579993 334 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 MIR2682-201ENST00000580305 110 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC004805.2-201ENST00000605382 482 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC002076.2-201ENST00000617362 122 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL160413.1-201ENST00000622780 310 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AL359757.2-201ENST00000624309 274 ntBASIC3.32□□□□□ -1.88
USP29Q9HBJ7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
USP29Q9HBJ7 AC138393.1-203ENST00000327086 343 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNU6-217P-201ENST00000384164 104 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 SNORD116-29-201ENST00000384516 83 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNU6-1011P-201ENST00000384668 107 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AF228730.4-201ENST00000421457 183 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC092573.2-201ENST00000434546 243 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 FABP5P14-201ENST00000437273 393 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC007677.1-201ENST00000445757 515 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNA5SP310-201ENST00000459084 116 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 SNORD19B-201ENST00000459623 84 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC104472.2-201ENST00000469035 601 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC087854.1-201ENST00000519706 414 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC245166.1-201ENST00000521012 253 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 FRG2DP-202ENST00000566967 323 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AL133255.1-201ENST00000606374 441 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 AC091903.1-201ENST00000624322 454 ntBASIC3.31□□□□□ -1.88
USP29Q9HBJ7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
USP29Q9HBJ7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 MIR412-201ENST00000362142 91 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 MIR128-1-201ENST00000384921 82 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SNORA40C-201ENST00000391285 128 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SAR1AP4-201ENST00000429225 591 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AL359672.1-201ENST00000442302 409 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC107399.1-201ENST00000451226 265 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 RNU7-138P-201ENST00000459479 64 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 HMGB1P30-201ENST00000492455 606 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AC079140.5-201ENST00000507882 310 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 RN7SKP24-201ENST00000515888 284 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
USP29Q9HBJ7 AP005597.4-201ENST00000526762 229 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms