Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 OR6C66P-201ENST00000414917 930 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 HMGB1P9-201ENST00000429856 646 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC104332.2-201ENST00000429959 156 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 RPL23AP20-201ENST00000447965 421 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AL162395.1-201ENST00000457882 422 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC091133.4-201ENST00000511142 308 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC105417.1-201ENST00000514691 285 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC025281.1-201ENST00000567026 265 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 MIR548AC-201ENST00000585049 88 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AL022154.1-201ENST00000604698 785 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC069234.5-201ENST00000611056 416 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 uc_338.11-201ENST00000619132 160 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AL359740.1-201ENST00000624340 592 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 AC110079.1-202ENST00000635213 138 ntBASIC2.86□□□□□ -1.95
ZNF541Q9H0D2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 OR4G2P-201ENST00000328113 903 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 RNU6-606P-201ENST00000384721 111 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 RPL21P90-201ENST00000415692 466 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 RPS15AP9-201ENST00000439856 381 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 RPS15AP27-201ENST00000449183 343 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 PSPHP1-201ENST00000450062 261 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AC233279.1-201ENST00000455300 423 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 RN7SL297P-201ENST00000483161 293 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 SNORA31.19-201ENST00000517079 126 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AC084851.1-201ENST00000529105 249 ntBASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF541Q9H0D2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF541Q9H0D2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZNF541Q9H0D2 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
ZNF541Q9H0D2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZNF541Q9H0D2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 RNU6-778P-201ENST00000363269 103 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1085P-201ENST00000363576 107 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.159-201ENST00000363674 87 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.381-201ENST00000365666 102 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 SNORD37.1-201ENST00000390968 65 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 MTCO3P40-201ENST00000392516 676 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 SKA2P1-201ENST00000425592 390 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AL596276.1-201ENST00000434465 418 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 BRK1P2-201ENST00000442875 223 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 MTATP6P7-201ENST00000453315 681 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 RPL9P33-201ENST00000484311 566 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 RPS27AP10-201ENST00000496103 208 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 SNORD27.1-201ENST00000516319 72 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC022880.1-201ENST00000534017 973 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 LINC00933-203ENST00000559812 219 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC007336.1-201ENST00000576365 3828 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AL391646.1-201ENST00000603860 190 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC004492.1-201ENST00000607036 742 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC099654.12-201ENST00000639868 649 ntBASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.96
ZNF541Q9H0D2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC110491.1-201ENST00000562191 2010 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 SNORA67.3-201ENST00000384366 140 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.481-201ENST00000384373 102 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC068050.1-201ENST00000394891 380 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 BPY2DP-201ENST00000422208 265 ntBASIC2.83□□□□□ -1.96
ZNF541Q9H0D2 AC098614.2-201ENST00000426040 255 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms