Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 U3.45-201ENST00000607547 219 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AC012531.5-201ENST00000611375 151 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AC022149.2-201ENST00000621061 203 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RPL9P7-201ENST00000330965 580 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC117470.1-201ENST00000381974 330 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL159169.1-201ENST00000421119 127 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL512844.2-201ENST00000433990 593 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL513043.1-201ENST00000439124 535 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL078601.1-201ENST00000444542 271 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RPS3AP46-201ENST00000448352 682 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL133162.1-201ENST00000463228 453 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RPL9P9-202ENST00000466501 579 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RN7SL442P-201ENST00000473804 320 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RPL23AP45-201ENST00000476406 468 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL135752.1-201ENST00000479477 471 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC022493.2-201ENST00000506122 481 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.661-201ENST00000516003 99 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-699P-201ENST00000517081 110 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC023442.1-201ENST00000531247 422 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 CPDP1-201ENST00000579660 283 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 MIR5187-201ENST00000583479 76 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 MIR5195-201ENST00000583555 115 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL121917.1-203ENST00000605534 577 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 FTX_3.1-201ENST00000610451 147 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 AL121772.2-201ENST00000614331 297 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
AMBRA1Q9C0C7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1032P-201ENST00000384100 107 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-217P-201ENST00000384164 104 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.459-201ENST00000384251 102 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 MCFD2P1-201ENST00000417812 300 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL139247.1-201ENST00000422768 325 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC098614.2-201ENST00000426040 255 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL133396.1-201ENST00000432048 687 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 DAP3P1-201ENST00000441522 278 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL031274.1-201ENST00000450334 232 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RPL12P25-201ENST00000455592 494 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 CEACAMP4-201ENST00000457676 421 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RPL32P34-201ENST00000486380 400 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC068781.1-201ENST00000488231 618 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 SNORA25.10-201ENST00000515926 124 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-703P-201ENST00000516946 107 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC109479.2-201ENST00000517842 174 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 MIR4273-201ENST00000582824 84 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 BNIP3P16-201ENST00000589779 534 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC008121.1-201ENST00000603244 268 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC136443.5-201ENST00000603741 370 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AC018889.1-201ENST00000605372 397 ntBASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
AMBRA1Q9C0C7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
AMBRA1Q9C0C7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms