Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC119751.3-201ENST00000399720 670 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AL359634.1-202ENST00000404721 284 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 SNORA11.2-201ENST00000408318 127 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 NCOR1P3-201ENST00000420479 303 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC104651.1-201ENST00000427559 735 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 HMGB1P31-201ENST00000437242 427 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC027119.1-201ENST00000440877 241 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 MTND5P14-201ENST00000441481 1267 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 RPL18AP17-201ENST00000455326 198 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 RPL37P6-201ENST00000460682 294 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AL133373.1-201ENST00000497098 94 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 RPF2P2-201ENST00000504693 896 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 SNORA31.17-201ENST00000516953 127 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC009902.1-201ENST00000519351 183 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC015712.3-201ENST00000559380 164 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 LINC00557-201ENST00000563184 1279 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC068338.1-201ENST00000565567 176 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 MIR4524B-201ENST00000581569 115 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC073410.2-201ENST00000603240 332 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC025754.2-201ENST00000606491 432 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC008993.2-201ENST00000631744 806 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 AC097655.1-201ENST00000635075 318 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
LIMD2Q9BT23 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AL391987.6-201ENST00000305671 199 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 SNORD33-201ENST00000362761 85 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 SNORD14B-201ENST00000364533 90 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 RNU6-487P-201ENST00000365430 104 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AL079342.2-201ENST00000403367 482 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 RPL37P10-201ENST00000412884 288 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 RPL21P24-201ENST00000413752 448 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC092473.1-201ENST00000441098 221 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC079776.3-201ENST00000450665 370 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 RNU7-95P-201ENST00000459222 64 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC026414.1-201ENST00000504046 698 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC090821.2-201ENST00000523552 176 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC136618.2-201ENST00000575091 400 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 uc_338.15-201ENST00000615470 191 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC092140.2-201ENST00000618027 521 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC093648.1-201ENST00000623546 606 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 AC093875.1-201ENST00000623688 504 ntBASIC0.67□□□□□ -2.3
LIMD2Q9BT23 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 OR5T3-201ENST00000303059 1023 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 RNU6-1122P-201ENST00000384449 107 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 RNU6-843P-201ENST00000384454 104 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 MTCO1P56-201ENST00000401674 224 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 RPS12P24-201ENST00000412619 387 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AC004965.1-201ENST00000413033 213 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 RPS27P16-201ENST00000425758 201 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 MTCO1P3-201ENST00000429327 192 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AL135790.2-201ENST00000437701 267 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 HMGN2P18-201ENST00000450680 270 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 SNRPFP4-201ENST00000456366 242 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AC087343.1-201ENST00000477341 475 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 RPL26P26-201ENST00000480251 434 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AP001025.1-201ENST00000486139 332 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 MTCYBP40-201ENST00000509390 1135 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AP003033.1-201ENST00000527244 415 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AC090115.3-201ENST00000553218 849 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 MIR3169-201ENST00000578032 83 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 DPPA3P3-201ENST00000603842 430 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 MIR6715A-201ENST00000615929 79 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 AL391516.1-201ENST00000554380 2449 ntBASIC0.66□□□□□ -2.3
LIMD2Q9BT23 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LIMD2Q9BT23 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RNU6-236P-201ENST00000363886 106 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RNU6-898P-201ENST00000365627 104 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 CBX3P9-201ENST00000402326 552 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms