Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU6-11P-201ENST00000364234 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-7-201ENST00000364784 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-8-201ENST00000365467 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-25P-201ENST00000383873 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-1-201ENST00000383898 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-48P-201ENST00000384161 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-36P-201ENST00000384172 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-4P-201ENST00000384205 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-5P-201ENST00000384238 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-3P-201ENST00000384314 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-16P-201ENST00000384385 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-15P-201ENST00000384534 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-2-201ENST00000384627 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-29P-201ENST00000384637 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-9-201ENST00000384776 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-33P-201ENST00000384793 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 MIR23A-201ENST00000385245 73 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 BX682237.1-201ENST00000415016 335 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 OR2B8P-201ENST00000432841 938 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 SEPT14P3-201ENST00000439401 183 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AL732372.2-207ENST00000445840 183 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 SEPT14P2-201ENST00000453405 183 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 SEPT14P4-201ENST00000513445 186 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 Y_RNA.704-201ENST00000516851 102 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AC134698.4-201ENST00000523451 826 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 FO082796.1-201ENST00000523795 183 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 HSPE1P20-201ENST00000538133 289 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RPS15AP11-201ENST00000594193 385 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 AL162413.1-201ENST00000603198 110 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-6P-201ENST00000606623 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.9
HERPUD2Q9BSE4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-78P-201ENST00000362897 107 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-527P-201ENST00000363425 104 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-266P-201ENST00000364225 107 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-483P-201ENST00000384088 108 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-1215P-201ENST00000384441 102 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-780P-201ENST00000391030 104 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RPL17P50-201ENST00000396131 546 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AC074117.2-201ENST00000417130 397 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RPL7P12-201ENST00000446719 750 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 MTCO3P38-201ENST00000468910 766 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AF213884.2-201ENST00000510417 903 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-835P-201ENST00000516974 104 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 ZNF519P2-201ENST00000557032 169 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AC105137.2-201ENST00000569073 466 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AC244517.12-201ENST00000623581 663 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 MTND5P19-201ENST00000424872 1794 ntBASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.91
HERPUD2Q9BSE4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 OR56A5-201ENST00000340110 738 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-525P-201ENST00000363685 104 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-487P-201ENST00000365430 104 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP219-201ENST00000390940 113 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 U6atac.2-201ENST00000408644 118 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 RPL30P4-201ENST00000429309 333 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AL591043.1-201ENST00000432461 424 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC009969.1-201ENST00000438726 172 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AL671855.1-201ENST00000446875 1203 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC023050.3-201ENST00000541142 333 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms