Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC018926.1-201ENST00000616335 435 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC099654.9-201ENST00000637055 678 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC245060.5-201ENST00000610778 3293 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 MTND5P35-201ENST00000557537 1720 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 SNORD114-19-201ENST00000363072 75 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 RNU4-38P-201ENST00000364472 129 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 MIR608-201ENST00000384820 100 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 MIR19B1-201ENST00000384829 87 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 RNU6-360P-201ENST00000390944 104 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 GTF2IP3-201ENST00000433887 494 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 HSPE1P13-201ENST00000451143 297 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC009474.2-201ENST00000451383 136 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AL163195.1-201ENST00000496941 348 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 CBX3P8-201ENST00000532412 525 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC025678.1-201ENST00000567861 338 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 MIR5094-201ENST00000578766 85 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 MIR4666A-201ENST00000580160 79 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 MIR4672-201ENST00000583126 81 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC112220.2-201ENST00000605513 533 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 AC096772.1-201ENST00000609146 564 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS25Q9BRG1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.55□□□□□ -2.32
VPS25Q9BRG1 Y_RNA.25-201ENST00000362528 102 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 Y_RNA.40-201ENST00000362645 93 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 RNU6-97P-201ENST00000363387 104 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 SNORA26.9-201ENST00000391322 122 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AL356776.1-201ENST00000406574 447 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 RNU4-27P-201ENST00000410889 139 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC004965.1-201ENST00000413033 213 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AL161935.2-201ENST00000414627 60 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 RPL21P111-201ENST00000418453 477 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 C8orf59P1-201ENST00000429930 303 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 HMGB3P12-201ENST00000438745 556 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC132479.1-201ENST00000449160 144 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 RPL30P6-201ENST00000475925 342 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 TRBVA-201ENST00000498804 316 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 MTND4P2-201ENST00000507767 1203 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC093809.1-201ENST00000509155 340 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC018630.3-201ENST00000542637 96 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AP005136.1-201ENST00000579765 429 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 MIR4303-201ENST00000581299 66 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC005786.1-201ENST00000588553 154 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 MIR6078-201ENST00000611069 100 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC040896.1-201ENST00000613819 479 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC009268.2-201ENST00000621925 457 ntBASIC0.54□□□□□ -2.32
VPS25Q9BRG1 AC233981.2-201ENST00000611524 1614 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC092447.10-201ENST00000620607 1652 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 FARSBP1-201ENST00000435808 1778 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 RNU6-529P-201ENST00000363383 104 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 SNORA7.1-201ENST00000363750 139 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 RNU6-432P-201ENST00000384196 109 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 TPMTP2-201ENST00000414372 726 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 SNRPEP10-201ENST00000420249 274 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 HMGN2P18-201ENST00000450680 270 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 UBE2DNL-203ENST00000474922 222 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 HMGN2P9-201ENST00000476875 229 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 MTCYBP40-201ENST00000509390 1135 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 RNU6-351P-201ENST00000516097 100 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC023632.1-201ENST00000518463 375 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC009902.1-201ENST00000519351 183 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC084364.2-201ENST00000546924 395 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC091544.4-201ENST00000555268 342 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 MIR4782-201ENST00000577987 79 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC078795.2-201ENST00000602835 1252 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AC025754.2-201ENST00000606491 432 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 uc_338.12-201ENST00000616344 181 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.53□□□□□ -2.32
VPS25Q9BRG1 AL353770.2-201ENST00000620024 78 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms