Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC009268.1-201ENST00000561352 1203 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.62□□□□□ -2.31
ABCA3Q99758 AC087045.1-201ENST00000605856 382 ntBASIC0.62□□□□□ -2.31
ABCA3Q99758 RNU6-884P-201ENST00000363889 107 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 RNU6-26P-201ENST00000383985 107 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
ABCA3Q99758 CR769776.1-201ENST00000441254 787 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA3Q99758 ZNF705CP-201ENST00000530515 889 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 AC023050.2-201ENST00000544968 387 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 CYB5AP5-201ENST00000549779 389 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 EIF4A1P12-201ENST00000551910 141 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 MIR4661-201ENST00000582720 75 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 AC009974.1-201ENST00000608881 455 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA3Q99758 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
ABCA3Q99758 RNU6-386P-201ENST00000362650 107 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 LSM6P2-201ENST00000552208 177 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA3Q99758 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.61□□□□□ -2.31
ABCA3Q99758 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.6□□□□□ -2.31
ABCA3Q99758 RNU1-96P-201ENST00000364163 162 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 RNU6-741P-201ENST00000383889 107 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.6□□□□□ -2.31
ABCA3Q99758 SCARNA16.2-201ENST00000516520 172 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 HMGN1P30-201ENST00000589286 268 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 AL158032.1-201ENST00000605401 106 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 AC006213.5-201ENST00000619673 288 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 AC009318.4-201ENST00000620496 486 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.6□□□□□ -2.31
ABCA3Q99758 MTND1P37-201ENST00000636562 264 ntBASIC0.6□□□□□ -2.31
ABCA3Q99758 RNU1-58P-201ENST00000362413 163 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
ABCA3Q99758 USP9YP26-201ENST00000421008 661 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 USP9YP18-201ENST00000425912 695 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 USP9YP17-201ENST00000444617 696 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 PRPS1P1-201ENST00000445305 876 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.59□□□□□ -2.31
ABCA3Q99758 AC245102.2-201ENST00000448956 180 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.59□□□□□ -2.31
ABCA3Q99758 AC008751.2-201ENST00000597885 980 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 AP000654.2-201ENST00000605633 586 ntBASIC0.59□□□□□ -2.31
ABCA3Q99758 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ABCA3Q99758 RNU6-360P-201ENST00000390944 104 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 RNU2-36P-201ENST00000410361 191 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 NDUFS5P4-201ENST00000412983 318 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC097463.2-201ENST00000421074 142 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.58□□□□□ -2.32
ABCA3Q99758 TRBVB-201ENST00000477100 408 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC121161.1-201ENST00000510606 652 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 RNU7-40P-201ENST00000516397 64 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 SCARNA1-201ENST00000517138 166 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 HIGD1AP6-201ENST00000521833 279 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC136628.3-201ENST00000521868 290 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC018618.2-201ENST00000604770 446 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 Z75746.1-201ENST00000440243 2080 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
ABCA3Q99758 SNORA25B-201ENST00000365507 128 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 MIR514A1-201ENST00000385133 98 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 UBE2V2P3-201ENST00000433562 437 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.58□□□□□ -2.32
ABCA3Q99758 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
ABCA3Q99758 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.58□□□□□ -2.32
ABCA3Q99758 AC108729.1-201ENST00000487812 947 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
ABCA3Q99758 AC004217.3-201ENST00000551552 878 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC022387.2-201ENST00000604050 448 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AC013470.4-201ENST00000619978 986 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 AP003400.6-201ENST00000624698 740 ntBASIC0.58□□□□□ -2.32
ABCA3Q99758 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.58□□□□□ -2.32
ABCA3Q99758 MIR135A2-201ENST00000384854 100 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 PIGPP2-201ENST00000411569 458 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 NANOGP2-201ENST00000435391 727 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA3Q99758 AL441985.1-201ENST00000457727 251 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 RPS26P55-201ENST00000471178 356 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AC015724.1-201ENST00000478577 156 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AC134050.1-201ENST00000495088 933 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 RNA5SP291-201ENST00000517222 105 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA3Q99758 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA3Q99758 AC019288.1-201ENST00000557918 224 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AC136932.1-201ENST00000574771 208 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 AP005229.2-201ENST00000609980 697 ntBASIC0.57□□□□□ -2.32
ABCA3Q99758 SNORD33-201ENST00000362761 85 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 MIR608-201ENST00000384820 100 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 MTND1P33-201ENST00000446251 917 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 COX7A2P2-201ENST00000505291 250 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.56□□□□□ -2.32
ABCA3Q99758 LINC00557-201ENST00000563184 1279 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 AL139344.1-201ENST00000605228 195 ntBASIC0.56□□□□□ -2.32
ABCA3Q99758 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA3Q99758 RNU6-921P-201ENST00000384361 107 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MIR1267-201ENST00000408723 78 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms