Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL118558.2-201ENST00000556294 238 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC106785.1-201ENST00000565935 262 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 MIR3199-1-201ENST00000582434 88 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC123912.5-201ENST00000605470 343 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC122108.2-201ENST00000611946 526 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC108206.1-201ENST00000570186 4159 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AL161912.2-201ENST00000565707 3007 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.231-201ENST00000364358 102 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 RNU4-12P-201ENST00000365233 139 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 MIR200C-201ENST00000384980 68 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 MIR218-1-201ENST00000384999 110 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 SNORD56-201ENST00000413522 71 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC112771.1-201ENST00000463581 102 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AP001025.1-201ENST00000486139 332 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 RN7SL633P-201ENST00000488974 297 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 RNU6-377P-201ENST00000515965 102 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 RNU1-45P-201ENST00000517191 141 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 MTND1P5-201ENST00000517906 940 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC136619.2-201ENST00000563361 631 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC092747.3-201ENST00000603769 301 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC073657.2-201ENST00000605661 303 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 uc_338.25-201ENST00000613756 156 ntBASIC2.72□□□□□ -1.97
CMTM3Q96MX0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.72□□□□□ -1.97
CMTM3Q96MX0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 SNORD114-19-201ENST00000363072 75 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 RNU6-622P-201ENST00000384272 103 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 U8.11-201ENST00000384699 133 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 U8.12-201ENST00000384701 133 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 RNA5SP390-201ENST00000410191 113 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 NUP35P1-201ENST00000422734 947 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 RPL30P4-201ENST00000429309 333 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 ERLEC1P1-201ENST00000433806 578 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 U8.18-201ENST00000459285 133 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC080013.2-201ENST00000460866 323 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC133134.1-201ENST00000466800 359 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC087884.1-201ENST00000469738 328 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 TBCAP3-201ENST00000512475 312 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC023632.4-201ENST00000517783 191 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 MTND1P35-201ENST00000526739 508 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC010525.2-201ENST00000590920 195 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 RNU6-89P-201ENST00000606519 100 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC092807.2-201ENST00000609367 243 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC090517.2-201ENST00000614966 680 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 AC024581.2-201ENST00000619986 252 ntBASIC2.71□□□□□ -1.98
CMTM3Q96MX0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CMTM3Q96MX0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 SNORD56.1-201ENST00000362913 68 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RNU6-451P-201ENST00000362921 107 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.505-201ENST00000384489 102 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.573-201ENST00000384763 105 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RNU6-220P-201ENST00000390919 107 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 FCF1P9-201ENST00000412546 282 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC138623.1-201ENST00000418060 216 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 SNRPEP10-201ENST00000420249 274 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AL591043.1-201ENST00000432461 424 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RNU6-1208P-201ENST00000459588 107 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 RPL23AP49-201ENST00000492925 468 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.7□□□□□ -1.98
CMTM3Q96MX0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.7□□□□□ -1.98
CMTM3Q96MX0 AC109329.1-201ENST00000518744 317 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms