Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 RNU6-158P-201ENST00000517104 100 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.05□□□□□ -2.4
USP9XQ93008 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 AC073544.2-201ENST00000601155 540 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AL713866.2-201ENST00000603579 219 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AL021997.1-201ENST00000605757 193 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC006963.1-201ENST00000624003 1052 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 MIR7157-201ENST00000635801 60 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 RNU4-7P-201ENST00000364758 141 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 MT-TQ-201ENST00000387372 72 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.04□□□□□ -2.4
USP9XQ93008 PGBD4P5-201ENST00000445958 426 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 OR52A4P-202ENST00000481634 799 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.04□□□□□ -2.4
USP9XQ93008 BNIP3P25-201ENST00000596023 559 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC098614.4-201ENST00000607601 462 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AL132822.1-201ENST00000617063 513 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC009509.4-201ENST00000619202 509 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.04□□□□□ -2.4
USP9XQ93008 ZNF663P-202ENST00000641770 1131 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AL049737.1-201ENST00000413920 1403 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 MTND5P17-201ENST00000418405 1603 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 RNU6-271P-201ENST00000363858 105 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
USP9XQ93008 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
USP9XQ93008 RNU6-272P-201ENST00000411028 104 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 RPL7L1P10-201ENST00000427790 463 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 RAP1BP2-201ENST00000478270 544 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.04□□□□□ -2.4
USP9XQ93008 SNORD116-28-201ENST00000516123 91 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 RN7SKP5-201ENST00000517045 272 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC018659.1-201ENST00000551083 169 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC107954.1-201ENST00000565906 727 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 MIR4422-201ENST00000581938 83 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AC099842.1-201ENST00000619919 596 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 MIR8065-201ENST00000620577 100 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 AL049641.1-201ENST00000441055 1948 ntBASIC0.04□□□□□ -2.4
USP9XQ93008 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
USP9XQ93008 RNU6-514P-201ENST00000384208 107 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 RNU6-348P-201ENST00000384386 107 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 U3.29-201ENST00000391296 212 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.03□□□□□ -2.4
USP9XQ93008 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 RPL23AP33-201ENST00000442301 452 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.03□□□□□ -2.4
USP9XQ93008 BET1P1-201ENST00000482276 359 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
USP9XQ93008 AC034114.1-201ENST00000520293 285 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.03□□□□□ -2.4
USP9XQ93008 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.03□□□□□ -2.4
USP9XQ93008 AP001596.2-201ENST00000608410 312 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AL591926.4-201ENST00000616895 298 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AL596245.1-201ENST00000618994 362 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 MIR6516-201ENST00000630554 81 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.03□□□□□ -2.4
USP9XQ93008 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
USP9XQ93008 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
USP9XQ93008 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 Y_RNA.246-201ENST00000364495 108 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 RNU6-10P-201ENST00000384036 107 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 RNU6-15P-201ENST00000384534 107 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
USP9XQ93008 RPL18AP17-201ENST00000455326 198 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 SNORD126-201ENST00000459475 77 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.03□□□□□ -2.4
USP9XQ93008 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.03□□□□□ -2.4
USP9XQ93008 MRPS36P4-201ENST00000534436 298 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.03□□□□□ -2.4
USP9XQ93008 AC022254.1-201ENST00000567857 235 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 MIR3678-201ENST00000578455 94 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 ZNF92P3-201ENST00000596594 954 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 AL355810.1-201ENST00000614629 552 ntBASIC0.03□□□□□ -2.4
USP9XQ93008 RNU6-40P-201ENST00000384254 107 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.02□□□□□ -2.41
USP9XQ93008 HMGN2P34-201ENST00000437647 269 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.02□□□□□ -2.41
USP9XQ93008 AP003066.2-201ENST00000529375 555 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AL136520.1-202ENST00000555494 763 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC136618.2-201ENST00000575091 400 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AL590240.4-201ENST00000616908 390 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC110792.3-201ENST00000595906 1614 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.02□□□□□ -2.41
USP9XQ93008 RNU6-945P-201ENST00000383947 107 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 SNORA25-201ENST00000384384 134 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 SNORA16.2-201ENST00000390991 127 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC069282.1-201ENST00000411911 526 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.02□□□□□ -2.41
USP9XQ93008 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.02□□□□□ -2.41
USP9XQ93008 SPINT5P-201ENST00000448174 155 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 SNRPGP6-201ENST00000451124 220 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AC093023.1-201ENST00000547375 507 ntBASIC0.02□□□□□ -2.41
USP9XQ93008 AL353149.1-201ENST00000610667 244 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms