Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SNORA62.3-201ENST00000365110 153 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 SNORA40C-201ENST00000391285 128 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 SNORA48.7-201ENST00000391302 135 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AL445529.1-201ENST00000398713 389 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AL445584.1-201ENST00000431451 330 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AL133396.1-201ENST00000432048 687 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC4Q92889 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC4Q92889 RPS4XP2-201ENST00000458402 793 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 U3.44-201ENST00000458938 192 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC4Q92889 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC4Q92889 RNU2-27P-201ENST00000516185 142 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 SCARNA16.2-201ENST00000516520 172 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 Y_RNA.720-201ENST00000517166 92 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 CPDP1-201ENST00000579660 283 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 MIR4680-201ENST00000580906 66 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.92□□□□□ -1.78
ERCC4Q92889 AC136601.2-201ENST00000604356 474 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AL591516.1-201ENST00000611326 274 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.92□□□□□ -1.78
ERCC4Q92889 Z69720.2-201ENST00000624755 279 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC4Q92889 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC4Q92889 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
ERCC4Q92889 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ERCC4Q92889 MTND4P1-201ENST00000457501 1466 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
ERCC4Q92889 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ERCC4Q92889 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ERCC4Q92889 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ERCC4Q92889 Y_RNA.459-201ENST00000384251 102 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 RNY1P14-201ENST00000384426 108 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 RNU6-331P-201ENST00000384724 107 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 RNU6-174P-201ENST00000410406 106 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC092047.1-201ENST00000424997 240 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
ERCC4Q92889 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.91□□□□□ -1.78
ERCC4Q92889 AL357552.1-201ENST00000445254 415 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC009237.8-201ENST00000445492 379 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 CECR9-201ENST00000453421 199 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 RN7SL594P-201ENST00000470590 287 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 KC877373.1-201ENST00000479066 408 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC021146.2-201ENST00000504736 556 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC113155.1-201ENST00000511141 769 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 SNORA25.10-201ENST00000515926 124 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.91□□□□□ -1.78
ERCC4Q92889 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
ERCC4Q92889 MIR3158-1-201ENST00000583596 81 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC005899.2-201ENST00000584353 90 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.91□□□□□ -1.78
ERCC4Q92889 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.91□□□□□ -1.78
ERCC4Q92889 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC138627.2-201ENST00000624202 601 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 AC007785.2-201ENST00000598627 1916 ntBASIC3.91□□□□□ -1.78
ERCC4Q92889 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ERCC4Q92889 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ERCC4Q92889 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC4Q92889 Y_RNA.144-201ENST00000363521 113 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 RNU6-1105P-201ENST00000384774 107 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 PTMAP2-201ENST00000397627 327 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 MRPL42P3-201ENST00000401492 326 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 RNU6-985P-201ENST00000410182 104 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 Y_RNA.623-201ENST00000411128 95 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.9□□□□□ -1.79
ERCC4Q92889 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.9□□□□□ -1.79
ERCC4Q92889 AC008267.5-201ENST00000424928 265 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AL590383.1-201ENST00000428602 75 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AC007919.1-201ENST00000429380 217 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 Z82210.1-201ENST00000440037 231 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 DAP3P1-201ENST00000441522 278 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 PIGFP3-201ENST00000441918 722 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 RNU1-61P-201ENST00000516107 151 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 RNU6-699P-201ENST00000517081 110 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AC025755.1-201ENST00000521306 278 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.9□□□□□ -1.79
ERCC4Q92889 TRAV32-201ENST00000553993 340 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.9□□□□□ -1.79
ERCC4Q92889 AP000787.2-201ENST00000604432 568 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AC106900.2-201ENST00000604994 317 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AC007485.1-201ENST00000616755 206 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 AC006133.1-201ENST00000617106 264 ntBASIC3.9□□□□□ -1.79
ERCC4Q92889 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
ERCC4Q92889 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC4Q92889 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC4Q92889 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ERCC4Q92889 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.89□□□□□ -1.79
ERCC4Q92889 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 MAPK10-362ENST00000641864 4484 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ERCC4Q92889 RNA5SP197-201ENST00000363357 119 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 SNORA73.2-201ENST00000364946 201 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 RNU1-115P-201ENST00000365329 160 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 RNU6-805P-201ENST00000365643 106 ntBASIC3.89□□□□□ -1.79
ERCC4Q92889 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms