Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RAP1BP3-201ENST00000407180 549 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 snoU109.2-201ENST00000459316 135 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RNU7-138P-201ENST00000459479 64 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RNU6-329P-201ENST00000459618 107 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RPL23AP14-201ENST00000468281 468 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RPL7P43-201ENST00000478876 753 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RNU6-864P-201ENST00000516256 108 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC087854.1-201ENST00000519706 414 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC022634.1-201ENST00000520765 532 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RNU6-323P-201ENST00000521915 107 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC243972.3-201ENST00000539655 198 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 UBE2V2P2-201ENST00000587677 504 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AC123912.5-201ENST00000605470 343 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AL355073.2-201ENST00000612106 557 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 Y_RNA.166-201ENST00000363730 102 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 MIR450B-201ENST00000401182 78 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 MTND3P8-201ENST00000412909 339 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 NDUFB4P5-201ENST00000415445 361 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AL096701.2-201ENST00000416920 238 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 TOMM20P4-201ENST00000427861 435 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 RPS4XP22-201ENST00000480755 780 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC008628.2-201ENST00000502605 298 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 Y_RNA.702-201ENST00000516843 96 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC006199.1-201ENST00000548728 219 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 MIR4742-201ENST00000581069 85 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 MIR3942-201ENST00000585264 109 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC006023.1-201ENST00000603944 259 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 RNU6-85P-201ENST00000605989 107 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 SCARNA4-202ENST00000625402 129 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
HMGB4Q8WW32 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HMGB4Q8WW32 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
HMGB4Q8WW32 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
HMGB4Q8WW32 ADAM3A-203ENST00000461344 2157 ntBASIC3.15□□□□□ -1.9
HMGB4Q8WW32 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMGB4Q8WW32 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
HMGB4Q8WW32 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HMGB4Q8WW32 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC138393.1-203ENST00000327086 343 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 MIR30E-201ENST00000362104 92 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-37P-201ENST00000362692 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-11P-201ENST00000364234 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-867P-201ENST00000364956 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-25P-201ENST00000383873 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-1-201ENST00000383898 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-48P-201ENST00000384161 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-36P-201ENST00000384172 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-4P-201ENST00000384205 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-5P-201ENST00000384238 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-3P-201ENST00000384314 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-16P-201ENST00000384385 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-15P-201ENST00000384534 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-2-201ENST00000384627 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-29P-201ENST00000384637 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-9-201ENST00000384776 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-33P-201ENST00000384793 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 VN1R36P-201ENST00000414936 291 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 PDCL2P1-201ENST00000419302 352 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 USP9YP8-201ENST00000441913 500 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms