Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 Y_RNA.138-201ENST00000363462 102 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 Y_RNA.255-201ENST00000364581 97 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 RNU6-1207P-201ENST00000384343 107 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 MTND3P8-201ENST00000412909 339 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 MTND2P23-201ENST00000422990 651 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AL590233.1-201ENST00000430017 456 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC079781.2-201ENST00000446424 169 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 MTCO2P29-201ENST00000465212 189 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC233702.1-201ENST00000482905 502 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 RPL23AP41-201ENST00000484754 458 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 EIF4EP3-201ENST00000498782 656 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 MTND4LP22-201ENST00000508209 276 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC112206.3-201ENST00000514578 389 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 RNA5SP337-201ENST00000517007 109 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC093331.1-201ENST00000521474 169 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AP003072.2-201ENST00000527756 676 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC087241.2-201ENST00000535801 324 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 FAM60BP-201ENST00000578364 658 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 MIR3146-201ENST00000580367 79 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 COX6CP3-201ENST00000580869 223 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AL360085.1-201ENST00000604713 532 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AL133215.3-201ENST00000609801 448 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.92□□□□□ -1.94
SNED1Q8TER0 AC090617.10-201ENST00000624308 134 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SNED1Q8TER0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNED1Q8TER0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 MTND5P33-201ENST00000571250 1450 ntBASIC2.92□□□□□ -1.94
SNED1Q8TER0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 OR4G1P-203ENST00000641984 1631 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNED1Q8TER0 RNA5SP99-201ENST00000364020 114 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 RNU6-996P-201ENST00000365438 107 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 SAR1AP2-201ENST00000392696 594 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 NCOR1P3-201ENST00000420479 303 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 MTATP6P4-201ENST00000427725 675 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC024082.2-201ENST00000434771 238 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC236972.2-201ENST00000434979 310 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC104308.1-201ENST00000454621 333 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AL163973.1-201ENST00000484753 577 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC006483.1-201ENST00000487308 313 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC021269.2-201ENST00000532318 330 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 OR4T1P-201ENST00000554933 911 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 MIR5007-201ENST00000583098 95 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC068790.3-201ENST00000602988 553 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC104237.2-201ENST00000612456 443 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 MIR6076-201ENST00000617521 113 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 AC097714.1-201ENST00000511272 1647 ntBASIC2.91□□□□□ -1.94
SNED1Q8TER0 ZNF72P-201ENST00000425869 1908 ntBASIC2.9□□□□□ -1.94
SNED1Q8TER0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SNED1Q8TER0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SNED1Q8TER0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.9□□□□□ -1.95
SNED1Q8TER0 U3.29-201ENST00000391296 212 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.9□□□□□ -1.95
SNED1Q8TER0 DDX3P2-201ENST00000446138 111 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.9□□□□□ -1.95
SNED1Q8TER0 Y_RNA.632-201ENST00000459189 102 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AC055855.1-201ENST00000489563 579 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 RPL23AP49-201ENST00000492925 468 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 RPL38P4-201ENST00000502376 214 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AC026436.1-201ENST00000510537 270 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AC114797.1-201ENST00000514003 728 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AC093677.1-201ENST00000514414 678 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 SCARNA24.1-201ENST00000516465 137 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 RNU6-410P-201ENST00000517006 107 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 SUB1P1-201ENST00000524415 382 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 BNIP3P6-201ENST00000549284 499 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 SETP2-201ENST00000553886 926 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 PSMA3P-201ENST00000555485 635 ntBASIC2.9□□□□□ -1.95
SNED1Q8TER0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.9□□□□□ -1.95
SNED1Q8TER0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SNED1Q8TER0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.9□□□□□ -1.95
SNED1Q8TER0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms