Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-817P-201ENST00000391083 104 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 HMGN2P39-201ENST00000398005 273 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AP000275.1-201ENST00000411943 390 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RPL31P63-201ENST00000422565 375 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 PTGES3P4-201ENST00000426243 356 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RPL23AP6-201ENST00000446637 472 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL009048.1-201ENST00000450437 298 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU6-1003P-201ENST00000517099 105 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL121821.2-201ENST00000556081 394 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC073544.2-201ENST00000601155 540 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL391834.2-201ENST00000609982 546 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC022306.3-201ENST00000619930 550 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL589994.2-201ENST00000621124 579 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC010608.3-201ENST00000625048 527 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 ZNF702P-202ENST00000434269 1966 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 ZNF29P-201ENST00000225587 168 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 RNU6-511P-201ENST00000363496 107 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 Y_RNA.269-201ENST00000364685 89 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 RNU6-701P-201ENST00000384059 107 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 RPS20P15-201ENST00000412792 311 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC106883.1-201ENST00000418805 562 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 RPL7P34-201ENST00000433316 712 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC004854.1-201ENST00000440356 349 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL137159.1-201ENST00000452808 512 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 CYP2C59P-201ENST00000457790 269 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AP001324.2-201ENST00000461163 319 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 RPL7P43-201ENST00000478876 753 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC013828.2-201ENST00000532487 235 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 LINC00933-203ENST00000559812 219 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MIR4299-201ENST00000577899 72 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MIR3167-201ENST00000579623 85 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MIR4307-201ENST00000582802 84 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC007363.1-201ENST00000604736 620 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL355297.2-201ENST00000604792 129 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AC091965.4-201ENST00000607691 587 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL365204.3-201ENST00000612448 685 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL139418.1-201ENST00000613613 177 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 AL109620.1-201ENST00000618738 1197 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MIR5739-201ENST00000619803 80 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 TEX21P-201ENST00000447107 1476 ntBASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
LMX1AQ8TE12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 Y_RNA.46-201ENST00000362695 102 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 RNU6-234P-201ENST00000365229 104 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 SNORA40.19-201ENST00000390846 128 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 MTCO2P8-201ENST00000412213 658 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 RPS12P24-201ENST00000412619 387 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AL158823.1-201ENST00000418441 478 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 MTCO2P23-201ENST00000425216 680 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AL591704.1-201ENST00000432574 275 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC009238.1-201ENST00000442165 424 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC009237.6-201ENST00000446969 424 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 RNU6-581P-201ENST00000516214 105 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 RNU6-201P-201ENST00000517100 61 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 SNORA31.23-201ENST00000517219 133 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC079598.5-201ENST00000547460 117 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AL356432.3-201ENST00000568952 465 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 MIR3146-201ENST00000580367 79 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 BNIP3P23-201ENST00000599655 511 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC243960.4-201ENST00000600532 288 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 MTCYBP22-201ENST00000603788 447 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC112187.2-201ENST00000604345 283 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AL139022.2-201ENST00000606934 443 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC090970.3-201ENST00000612566 866 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.41□□□□□ -2.18
LMX1AQ8TE12 MTND5P42-201ENST00000637720 498 ntBASIC1.41□□□□□ -2.18
LMX1AQ8TE12 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms