Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 TEX21P-201ENST00000447107 1476 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC103710.2-202ENST00000641454 2853 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SNORD3E-201ENST00000362899 217 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RNU6-1280P-201ENST00000365211 107 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RNU6-169P-201ENST00000365336 107 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SNORA24.1-201ENST00000384401 135 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 MIR144-201ENST00000384886 86 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 MIR147B-201ENST00000390185 80 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SNORA26.8-201ENST00000391306 124 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RNU2-20P-201ENST00000410425 191 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RPS3AP3-201ENST00000411933 242 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 MED13P1-201ENST00000428342 171 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 FABP5P14-201ENST00000437273 393 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RPS15AP9-201ENST00000439856 381 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC011005.2-201ENST00000487324 359 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC022493.1-201ENST00000492984 337 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 RNU6-123P-201ENST00000516163 102 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SCARNA24.1-201ENST00000516465 137 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 ACA59.2-201ENST00000517061 156 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 SCARNA3-201ENST00000517097 143 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC010186.2-204ENST00000537668 439 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC012414.6-201ENST00000568241 401 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 MIR4765-201ENST00000585007 77 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AL022154.1-201ENST00000604698 785 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AL158032.1-201ENST00000605401 106 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC012409.4-201ENST00000612923 249 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 uc_338.14-201ENST00000613162 166 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC010678.1-201ENST00000614118 713 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC024940.5-201ENST00000622889 474 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 AL109809.4-201ENST00000603520 2185 ntBASIC1.69□□□□□ -2.14
LINC01560Q8TB33 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01560Q8TB33 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 CKAP2P1-201ENST00000555477 2049 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 RNY4P34-201ENST00000364779 95 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 RNU6-395P-201ENST00000365662 106 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 SNORA20.2-201ENST00000383922 131 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 RNU6-195P-201ENST00000411352 109 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC127391.1-201ENST00000411737 98 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 HMGN1P14-201ENST00000412459 517 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC016831.2-201ENST00000417179 352 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 EIF1AXP1-201ENST00000419267 435 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 MTND2P18-201ENST00000419962 1030 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC092447.3-201ENST00000426027 686 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AL583843.1-201ENST00000456070 346 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 DYNLL1P5-201ENST00000467158 270 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 MTND3P7-201ENST00000474435 343 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 SNORA25.11-201ENST00000515935 105 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 OR4R1P-201ENST00000529879 463 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 MIR5694-201ENST00000581190 76 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AL121992.2-201ENST00000606262 256 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AL133173.2-201ENST00000614270 90 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC008250.2-201ENST00000615261 205 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AL359547.2-201ENST00000615810 418 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC091931.1-201ENST00000623488 728 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 MIR7157-201ENST00000635801 60 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
LINC01560Q8TB33 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AL359854.1-201ENST00000614203 1594 ntBASIC1.68□□□□□ -2.14
LINC01560Q8TB33 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01560Q8TB33 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms