Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEDD1Q8NHV4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEDD1Q8NHV4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 RNU6-270P-201ENST00000364131 105 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.570-201ENST00000384750 101 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 RPL30P13-201ENST00000418873 348 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 AL117339.2-201ENST00000430475 180 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 AC016700.2-201ENST00000446011 156 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 RPL23AP3-201ENST00000453844 468 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 AC103996.1-201ENST00000555468 102 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 AC090616.3-201ENST00000582184 217 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 VN1R85P-201ENST00000601587 426 ntBASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEDD1Q8NHV4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 RNU4-11P-201ENST00000365287 132 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 RNA5SP283-201ENST00000365604 119 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 RNU6-211P-201ENST00000384047 107 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 MIR92A2-201ENST00000385299 75 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 SNORA46.1-201ENST00000391069 153 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 RPS4XP3-201ENST00000398541 413 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AL117339.3-201ENST00000418733 162 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 MIR892C-201ENST00000516410 77 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 RNU6-612P-201ENST00000516909 102 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 MIR5582-201ENST00000579697 68 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AC039056.2-201ENST00000622261 511 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 snoU18.1-201ENST00000629629 71 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 AL592437.2-201ENST00000421655 2434 ntBASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEDD1Q8NHV4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 RNU6-989P-201ENST00000362756 107 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.525-201ENST00000384570 113 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 RNA5SP213-201ENST00000391031 106 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 RPL21P65-201ENST00000406094 466 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC134698.5-201ENST00000519444 336 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC090281.1-201ENST00000523019 276 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AC010928.2-201ENST00000588017 287 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 AL591926.4-201ENST00000616895 298 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 MIR3658-201ENST00000636291 56 ntBASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEDD1Q8NHV4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.84□□□□□ -1.64
NEDD1Q8NHV4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NEDD1Q8NHV4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
NEDD1Q8NHV4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NEDD1Q8NHV4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 IQCB2P-201ENST00000401788 1633 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 Y_RNA.182-201ENST00000363880 111 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RN7SKP280-201ENST00000364196 304 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RNU6-384P-201ENST00000364900 104 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RNU6-476P-201ENST00000384726 107 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 HDGFP1-201ENST00000405943 252 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RPL7AP73-201ENST00000413490 353 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 AL031736.2-201ENST00000426573 787 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 AC011742.1-201ENST00000431448 434 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 USP9YP7-201ENST00000436723 430 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 AL162151.2-201ENST00000448875 158 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 EEF1B2P7-201ENST00000451177 676 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 USP9YP32-201ENST00000452432 430 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RPL7AP28-201ENST00000464513 571 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 RNU6-589P-201ENST00000516485 107 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 TRAV37-201ENST00000553906 342 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 AC060766.3-201ENST00000591442 263 ntBASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 SRGNP1-201ENST00000603392 451 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms