Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-486P-201ENST00000363116 107 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-744P-201ENST00000365557 107 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-1316P-201ENST00000384242 108 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 SNORD14D-201ENST00000384390 87 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC092634.2-201ENST00000428146 1010 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MTCO3P45-201ENST00000443036 613 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 GDI2P2-201ENST00000445131 608 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 snoU13.19-201ENST00000459148 104 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RPL31P60-201ENST00000478450 367 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-416P-201ENST00000516265 103 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC012414.2-201ENST00000559474 187 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MIR1305-201ENST00000408300 86 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-77P-201ENST00000410554 91 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 TAF13P2-201ENST00000416876 286 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC007742.1-201ENST00000425789 329 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 ELOCP26-201ENST00000436067 329 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 HSPE1P21-201ENST00000438283 308 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC021755.4-201ENST00000616620 456 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AL357080.1-201ENST00000617394 239 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 CCNG1P1-201ENST00000406783 885 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 HMGB1P35-201ENST00000503360 598 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC118282.2-201ENST00000508739 374 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 NACAP3-201ENST00000552100 481 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 SNRPGP1-201ENST00000553864 222 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC012414.6-201ENST00000568241 401 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MIR4636-201ENST00000582271 80 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 U3.20-201ENST00000390909 217 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 NDUFS5P4-201ENST00000412983 318 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 OFD1P3Y-201ENST00000453312 783 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC026410.2-201ENST00000460281 156 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC104629.1-201ENST00000494226 508 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MRPS33P3-201ENST00000513456 322 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MZT1P2-201ENST00000604387 248 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC007038.2-201ENST00000608095 740 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.67-201ENST00000362870 100 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC083875.1-201ENST00000419509 405 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RPS15AP9-201ENST00000439856 381 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AL022238.1-201ENST00000442557 355 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 LARP7P2-201ENST00000575306 125 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MIR3167-201ENST00000579623 85 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AP000238.1-201ENST00000608759 426 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MTND1P21-201ENST00000412991 285 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RSL24D1P8-201ENST00000434442 492 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC026616.1-201ENST00000523157 525 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-1192P-201ENST00000612197 107 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 RNU6-489P-201ENST00000618289 107 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AC002550.2-201ENST00000621246 394 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 MTND1P37-201ENST00000636562 264 ntBASIC0.3□□□□□ -2.36
SYNE1Q8NF91 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.3□□□□□ -2.36
SYNE1Q8NF91 SNORA23-201ENST00000365128 182 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MIR301A-201ENST00000385261 86 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MIR618-201ENST00000385287 98 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNA5SP501-201ENST00000410990 112 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 TPMTP2-201ENST00000414372 726 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL353691.1-201ENST00000451332 387 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MTND3P4-201ENST00000453537 303 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC093677.1-201ENST00000514414 678 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-1183P-201ENST00000517054 60 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AP003484.1-201ENST00000530974 250 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 ZNF92P2-201ENST00000600543 1059 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC019226.1-201ENST00000625666 515 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 OR5T3-201ENST00000303059 1023 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-657P-201ENST00000383904 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 EIF4EP2-201ENST00000422816 654 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms