Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC136619.2-201ENST00000563361 631 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 MIR4293-201ENST00000584305 78 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 RPL30P11-203ENST00000598995 310 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AC024060.1-201ENST00000607052 494 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AC096772.1-201ENST00000609146 564 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AL133445.2-201ENST00000611191 527 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 AL512427.1-201ENST00000618593 349 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ZNF439Q8NDP4 MTND5P33-201ENST00000571250 1450 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 SNORA63.3-201ENST00000362682 132 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RNU6-560P-201ENST00000364007 108 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RNU2-41P-201ENST00000410991 178 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 MTCO1P17-201ENST00000411522 491 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 USP9YP35-201ENST00000435696 412 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AP000542.1-201ENST00000448473 371 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RN7SKP219-201ENST00000516825 296 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RNU6-143P-201ENST00000516942 93 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 VN1R83P-201ENST00000595685 445 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC112220.2-201ENST00000605513 533 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC084824.5-201ENST00000612009 413 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC090970.3-201ENST00000612566 866 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 MIR8074-201ENST00000615081 81 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC006338.1-201ENST00000618453 749 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC091965.5-201ENST00000624785 342 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC090517.3-201ENST00000625170 141 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 AC091812.1-201ENST00000432235 1948 ntBASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.06□□□□□ -2.24
ZNF439Q8NDP4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RNU6-14P-201ENST00000384630 106 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL359704.1-201ENST00000411586 781 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL592045.1-201ENST00000429867 352 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 HMGB1P31-201ENST00000437242 427 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 MTCO1P27-201ENST00000448269 226 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC245102.2-201ENST00000448956 180 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 ZNF886P-201ENST00000450781 723 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RPL39P36-201ENST00000490784 156 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC008837.2-201ENST00000513076 418 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RNU1-92P-201ENST00000517017 135 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RNU6-64P-201ENST00000517119 105 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RNU6-586P-201ENST00000517265 104 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 COPS8P3-201ENST00000526024 482 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AP000763.2-201ENST00000540641 163 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 RPS3AP4-201ENST00000555161 764 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 BNIP3P27-201ENST00000599991 412 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC092574.1-201ENST00000609771 420 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC021755.4-201ENST00000616620 456 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL132822.1-201ENST00000617063 513 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AL158163.2-201ENST00000619110 700 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 AC112204.3-201ENST00000623822 332 ntBASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF439Q8NDP4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 SNORD114-19-201ENST00000363072 75 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 Y_RNA.311-201ENST00000365068 96 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 SNORD14D-201ENST00000384390 87 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RNU6-817P-201ENST00000391083 104 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 FTH1P15-201ENST00000406984 280 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 MIR320C1-201ENST00000408566 88 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RNA5SP100-201ENST00000410903 110 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RNA5SP59-201ENST00000410922 110 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 CR769776.1-201ENST00000441254 787 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 EEF1E1P1-201ENST00000446998 430 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 BTF3P15-201ENST00000455606 336 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RN7SKP210-201ENST00000459176 261 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms