Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU4-77P-201ENST00000516692 156 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 RNU6-567P-201ENST00000516746 107 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 Y_RNA.721-201ENST00000517207 102 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 IGKV2-38-201ENST00000517443 247 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AC133555.2-201ENST00000550213 292 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 MIR4680-201ENST00000580906 66 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AC116312.1-201ENST00000606841 314 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AL359198.2-201ENST00000611836 194 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 RMST_6.1-201ENST00000611980 203 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AC091903.1-201ENST00000624322 454 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AL355480.1-201ENST00000629041 99 ntBASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
CLRN3Q8NCR9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 OR5P1P-201ENST00000299512 925 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC021146.4-201ENST00000309229 279 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC126755.2-208ENST00000327792 462 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC138969.1-213ENST00000331436 462 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RNU6-212P-201ENST00000362642 104 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 Y_RNA.405-201ENST00000383979 100 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 SNORA29-201ENST00000384183 140 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 Y_RNA.451-201ENST00000384200 100 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 SNORA37-201ENST00000384504 129 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 Y_RNA.524-201ENST00000384564 100 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 Y_RNA.561-201ENST00000384694 100 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 SNORA26.3-201ENST00000391119 136 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MIR190B-201ENST00000401119 79 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AL133475.1-201ENST00000404414 305 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 U3.36-201ENST00000408418 213 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC009414.1-201ENST00000427200 443 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MTCO3P29-201ENST00000432119 779 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC009296.1-201ENST00000443146 155 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AL500522.2-201ENST00000448562 343 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC009127.1-201ENST00000467090 155 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RN7SL222P-201ENST00000476452 299 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RPL30P1-201ENST00000488676 339 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 IGLV2-34-201ENST00000490007 283 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RPL22P13-201ENST00000493291 347 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC021146.2-201ENST00000504736 556 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 COX6B1P5-201ENST00000509843 249 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RNU6-911P-201ENST00000516523 104 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 HSBP1P1-201ENST00000555205 166 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MIR3136-201ENST00000583498 78 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC022726.1-201ENST00000587475 207 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 FAM27B-201ENST00000610601 213 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AL159153.1-201ENST00000619688 317 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AC243829.7-201ENST00000633081 225 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MIR4272-201ENST00000635924 64 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 MTND5P27-201ENST00000428871 1720 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
CLRN3Q8NCR9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC110774.1-201ENST00000623567 2018 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 SNORA51.1-201ENST00000363243 140 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 MIR628-201ENST00000385229 95 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 RPL34P20-201ENST00000442771 351 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 snoU13.20-201ENST00000459180 104 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 snoU13.14-201ENST00000459372 104 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC087477.1-201ENST00000465747 340 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC072052.1-201ENST00000496556 306 ntBASIC3.37□□□□□ -1.87
CLRN3Q8NCR9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms