Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC093899.1-201ENST00000457984 376 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AL139824.2-201ENST00000458731 1095 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 MED28P2-201ENST00000475771 317 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC020699.1-201ENST00000505161 445 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNU6-667P-201ENST00000517186 102 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 MTATP6P15-201ENST00000527233 835 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AP005639.2-201ENST00000527592 928 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 MIR3146-201ENST00000580367 79 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC009977.1-201ENST00000586015 570 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC093788.1-201ENST00000609356 927 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
ZIC4Q8N9L1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.4□□□□□ -2.18
ZIC4Q8N9L1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 RNU6-1010P-201ENST00000362757 107 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 RNU6-433P-201ENST00000363216 104 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 SNORA4.3-201ENST00000365564 137 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 SMIM11P1-201ENST00000369586 178 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 RNU6-190P-201ENST00000384154 102 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 MIR29C-201ENST00000385231 88 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 USP9YP24-201ENST00000434374 697 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 MTND2P29-201ENST00000438595 412 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 PTENP1-201ENST00000447117 1215 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC245102.2-201ENST00000448956 180 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 snoU109.3-201ENST00000459477 145 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC006512.1-201ENST00000468816 291 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC109927.2-201ENST00000506416 303 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 RNU2-53P-201ENST00000516257 147 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC109329.1-201ENST00000518744 317 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC023050.2-201ENST00000544968 387 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC126118.1-201ENST00000607744 628 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC106052.1-201ENST00000608029 497 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 uc_338.12-201ENST00000616344 181 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AC108479.2-201ENST00000617314 601 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 AL049777.1-201ENST00000622740 518 ntBASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
ZIC4Q8N9L1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RBBP8P1-201ENST00000449447 1844 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 SNORA8-201ENST00000384574 139 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RNU6-636P-201ENST00000384598 107 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 MIR186-201ENST00000384988 86 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RNA5SP212-201ENST00000391223 107 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RNU2-36P-201ENST00000410361 191 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC008267.5-201ENST00000424928 265 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AMD1P1-201ENST00000457220 922 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC104685.1-201ENST00000502445 371 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RNU6-1092P-201ENST00000516955 87 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 DUXAP5-201ENST00000529668 529 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AP000763.2-201ENST00000540641 163 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 ARL2BPP2-201ENST00000550907 489 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC093249.1-201ENST00000567049 203 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AL078605.1-201ENST00000603529 500 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC112187.2-201ENST00000604345 283 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC025754.2-201ENST00000606491 432 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC098614.4-201ENST00000607601 462 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AC130324.3-201ENST00000614165 542 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 AP000484.1-201ENST00000620067 1252 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 HAUS6P2-201ENST00000433254 2404 ntBASIC1.39□□□□□ -2.19
ZIC4Q8N9L1 RNA5SP363-201ENST00000365072 115 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 RNA5SP465-201ENST00000391195 109 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AL033519.2-201ENST00000403958 392 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 EXOSC3P1-201ENST00000448649 500 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC134050.1-201ENST00000495088 933 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms