Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 RNU6-384P-201ENST00000364900 104 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 MIR10A-201ENST00000385043 110 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 TOMM20P4-201ENST00000427861 435 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC083904.1-201ENST00000487828 231 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC010486.1-201ENST00000511793 424 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 RNA5SP385-201ENST00000515947 110 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC069113.1-201ENST00000517763 267 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 MIR548S-201ENST00000581352 82 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 BNIP3P25-201ENST00000596023 559 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 AC093831.2-201ENST00000624393 3427 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 MAPK10-322ENST00000641485 4530 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 RNU6-266P-201ENST00000364225 107 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 Z98749.2-208ENST00000381646 500 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 RNU1-101P-201ENST00000391171 127 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 RAP1BP3-201ENST00000407180 549 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 RPL21P111-201ENST00000418453 477 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 USP9YP20-201ENST00000419224 558 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AL513185.2-201ENST00000425543 193 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 MTATP6P23-201ENST00000440153 476 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC025750.2-201ENST00000442609 450 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 BTF3P15-201ENST00000455606 336 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 SNORA59A-201ENST00000459326 152 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC096576.1-201ENST00000489014 359 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC097462.2-201ENST00000504623 481 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 FAM206BP-201ENST00000510179 541 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 SNORA20.3-201ENST00000516880 132 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 SNORA25.17-201ENST00000517184 124 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC011712.1-201ENST00000588959 234 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC002044.1-201ENST00000606707 158 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AL591516.1-201ENST00000611326 274 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC093913.1-201ENST00000614178 329 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC093536.2-201ENST00000565257 1406 ntBASIC2.81□□□□□ -1.96
BEST3Q8N1M1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
BEST3Q8N1M1 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 SNORA80A-201ENST00000363922 136 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 SNORA46-201ENST00000384762 135 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AC245054.2-201ENST00000415639 319 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AL353572.1-201ENST00000442490 417 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 HMGN2P10-201ENST00000448085 265 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 MTCO2P30-201ENST00000503662 364 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 TBCAP3-201ENST00000512475 312 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 SNORA19.2-201ENST00000516013 114 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AC090136.1-201ENST00000520009 240 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AC134698.4-201ENST00000523451 826 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AP000889.1-201ENST00000530968 660 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AP000763.2-201ENST00000540641 163 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 MIR6134-201ENST00000617606 109 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 AL136221.1-201ENST00000621449 509 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 MIR3199-2-201ENST00000636243 86 ntBASIC2.8□□□□□ -1.96
BEST3Q8N1M1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.8□□□□□ -1.96
BEST3Q8N1M1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 SNORD113-7-201ENST00000363762 77 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.279-201ENST00000364763 95 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 RNU6-7-201ENST00000364784 107 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 RNU6-8-201ENST00000365467 107 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms