Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RAC1P3-201ENST00000416129 580 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC092423.1-201ENST00000430165 186 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 PRELID3BP1-201ENST00000457142 540 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 RPS29P27-201ENST00000463711 170 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 RNA5SP143-201ENST00000516936 115 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 RNU6-182P-201ENST00000516970 105 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 RN7SL435P-201ENST00000584418 282 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC064801.1-201ENST00000612025 407 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 MIR6075-201ENST00000620782 95 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC004944.1-201ENST00000517807 3059 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 RNU6-198P-201ENST00000384258 104 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR628-201ENST00000385229 95 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR23A-201ENST00000385245 73 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 SNORD66.1-201ENST00000391230 76 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC005300.1-201ENST00000428401 373 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 HMGN2P20-201ENST00000437531 273 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 FCF1P4-201ENST00000448326 183 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AL441985.1-201ENST00000457727 251 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 RPL23AP65-201ENST00000475608 468 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MED28P2-201ENST00000475771 317 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC022080.3-201ENST00000544433 482 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC009163.5-201ENST00000575421 637 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR5685-201ENST00000579080 79 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR1244-1-201ENST00000612829 85 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AL159153.1-201ENST00000619688 317 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR6500-201ENST00000622700 86 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC130454.1-201ENST00000622948 401 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR1244-3-201ENST00000635744 85 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR1244-2-201ENST00000636449 85 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 MIR1244-4-202ENST00000636813 85 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 AC241585.2-209ENST00000638217 143 ntBASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.51□□□□□ -1.69
NPAS4Q8IUM7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AC139713.2-215ENST00000641428 5037 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.105-201ENST00000363182 111 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 SNORD27-201ENST00000363981 72 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 FTH1P15-201ENST00000406984 280 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 RNA5SP38-201ENST00000410750 119 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 CTSL3P-202ENST00000412179 788 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AC245291.1-201ENST00000419501 328 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AL358232.1-201ENST00000448030 501 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AL513124.1-201ENST00000450410 614 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 LINC01399-202ENST00000458450 244 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 RNU7-23P-201ENST00000459465 62 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 TRBVB-201ENST00000477100 408 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AP003733.2-201ENST00000529409 171 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AC006199.1-201ENST00000548728 219 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 HMGN2P15-201ENST00000585707 270 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 VN1R91P-201ENST00000594377 169 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AC097372.5-201ENST00000623665 376 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 AP001148.1-201ENST00000624124 2359 ntBASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPAS4Q8IUM7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 SNORD56.1-201ENST00000362913 68 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 SNORD50.1-201ENST00000362987 71 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RNU6-774P-201ENST00000363238 107 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.150-201ENST00000363562 102 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RNU6-338P-201ENST00000383888 105 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 RNU6-142P-201ENST00000384019 107 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.462-201ENST00000384268 102 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.478-201ENST00000384358 107 ntBASIC4.49□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.555-201ENST00000384673 110 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 415.8 ms