Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 MIR5571-201ENST00000577998 113 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 NBR2-204ENST00000587322 63 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 BNIP3P30-201ENST00000601184 574 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AP001486.3-201ENST00000615334 372 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC010378.1-201ENST00000619270 362 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC138627.2-201ENST00000624202 601 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AC092608.2-201ENST00000624427 218 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.74□□□□□ -1.97
PRPF39Q86UA1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PRPF39Q86UA1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 OR4G2P-201ENST00000328113 903 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-1120P-201ENST00000362988 108 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-45P-201ENST00000384471 107 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-443P-201ENST00000384780 107 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RAP1BP3-201ENST00000407180 549 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 U6atac.2-201ENST00000408644 118 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MTATP6P18-201ENST00000417994 673 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AL353621.1-201ENST00000418219 243 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 CALM1P1-201ENST00000442082 433 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RPL23AP20-201ENST00000447965 421 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC080013.2-201ENST00000460866 323 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC079140.3-201ENST00000511111 550 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC074344.1-201ENST00000512823 224 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC104136.1-201ENST00000512969 394 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MIR4703-201ENST00000577728 79 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 AC025449.1-201ENST00000603896 529 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 RNU6-91P-201ENST00000607774 107 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 HMGB1P24-202ENST00000615653 685 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.73□□□□□ -1.97
PRPF39Q86UA1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
PRPF39Q86UA1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 OR56A5-201ENST00000340110 738 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RNU6-384P-201ENST00000364900 104 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RNU6-606P-201ENST00000384721 111 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AL445529.1-201ENST00000398713 389 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RNU1-86P-201ENST00000516108 154 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RNU1-107P-201ENST00000516617 154 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RPL7P20-201ENST00000520308 745 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RPS15AP11-201ENST00000594193 385 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AC073539.2-201ENST00000597113 165 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AL356575.1-201ENST00000603008 283 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PRPF39Q86UA1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.72□□□□□ -1.97
PRPF39Q86UA1 ZNF680P1-201ENST00000436625 1469 ntBASIC2.71□□□□□ -1.97
PRPF39Q86UA1 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 SNORD114-19-201ENST00000363072 75 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 RNA5SP126-201ENST00000365092 109 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 RNU6-715P-201ENST00000365204 103 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 SNORD116-20-201ENST00000384529 92 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 GSTA9P-201ENST00000406231 611 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 CYCSP48-201ENST00000417124 323 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 AC002486.1-201ENST00000435098 391 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 HMGB1P31-201ENST00000437242 427 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 CACYBPP2-201ENST00000453625 678 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
PRPF39Q86UA1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
PRPF39Q86UA1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.71□□□□□ -1.98
PRPF39Q86UA1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.71□□□□□ -1.98
PRPF39Q86UA1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms