Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RNU6-251P-201ENST00000363235 104 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-923P-201ENST00000364753 107 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 MTCYBP29-201ENST00000436327 1006 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AC027119.1-201ENST00000440877 241 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 SNORD116-28-201ENST00000516123 91 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 SNORA70.16-201ENST00000516390 95 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AC026371.1-201ENST00000551867 419 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RNU4-23P-201ENST00000362839 140 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RPL22P13-201ENST00000493291 347 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RNU7-40P-201ENST00000516397 64 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AP003049.1-201ENST00000529418 457 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 ADAM3B-201ENST00000569937 840 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RPL30P11-203ENST00000598995 310 ntBASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-348P-201ENST00000384386 107 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 Y_RNA.552-201ENST00000384665 112 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 MIR506-201ENST00000384998 124 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC069282.1-201ENST00000411911 526 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 BPY2DP-201ENST00000422208 265 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL133373.1-201ENST00000497098 94 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-319P-201ENST00000516025 108 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-1004P-201ENST00000516584 111 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNA5SP137-201ENST00000516833 135 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL022345.2-201ENST00000606307 135 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL078604.3-201ENST00000615580 211 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-452P-201ENST00000384406 107 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-30P-201ENST00000384561 107 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU2-7P-201ENST00000410794 178 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL135790.2-201ENST00000437701 267 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 Y_RNA.654-201ENST00000497848 106 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNA5SP134-201ENST00000516492 96 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-902P-201ENST00000517212 91 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 MIR3937-201ENST00000580135 106 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC090578.1-201ENST00000604955 591 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 MTND4P14-201ENST00000435799 1354 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 RPL23AP54-201ENST00000495129 419 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC090142.3-201ENST00000519012 385 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 EIF1P4-201ENST00000572664 335 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AL022345.1-201ENST00000607292 135 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC007349.4-201ENST00000608114 532 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 AC104465.1-201ENST00000611365 139 ntBASIC0.03□□□□□ -2.4
VPS13BQ7Z7G8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 C1DP1-201ENST00000426049 402 ntBASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 AC104164.3-201ENST00000467363 1258 ntBASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 AC093677.1-201ENST00000514414 678 ntBASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-197P-201ENST00000516680 100 ntBASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13BQ7Z7G8 RNA5SP258-201ENST00000362750 119 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 SNORD118-201ENST00000363593 134 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RPL7P43-201ENST00000478876 753 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RN7SKP287-201ENST00000516546 266 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-1282P-201ENST00000516735 96 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 NRON-201ENST00000517270 370 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RAB11AP2-201ENST00000545905 639 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC006199.1-201ENST00000548728 219 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNA5SP496-201ENST00000391240 109 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 EIF1P1-201ENST00000421436 341 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 COX7A2P2-201ENST00000505291 250 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC008498.1-201ENST00000613012 531 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AL512506.2-201ENST00000624472 458 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 SNORA9.1-201ENST00000362412 131 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-72P-201ENST00000384285 79 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-1184P-201ENST00000384588 108 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNU1-119P-201ENST00000391122 165 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 VPS26BP1-201ENST00000417155 755 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms