Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC098862.1-201ENST00000504991 413 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AP003355.1-201ENST00000518956 587 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC009268.1-201ENST00000561352 1203 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC242628.1-201ENST00000606810 391 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC024060.1-201ENST00000607052 494 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC117490.2-201ENST00000610042 594 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 SNORA8.3-201ENST00000384679 139 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 MIR508-201ENST00000384857 115 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 MIR888-201ENST00000401186 77 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 NANOGP2-201ENST00000435391 727 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 RPS27P22-201ENST00000478056 241 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC022483.1-201ENST00000514020 567 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AL356432.3-201ENST00000568952 465 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC004908.3-201ENST00000610248 625 ntBASIC0.33□□□□□ -2.36
CSMD3Q7Z407 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.33□□□□□ -2.36
CSMD3Q7Z407 SNORA63.3-201ENST00000362682 132 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 MIR218-1-201ENST00000384999 110 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 RPL22P22-201ENST00000395439 379 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 RNU6-491P-201ENST00000516099 110 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AP003122.4-201ENST00000530980 758 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AL391813.1-201ENST00000603098 260 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 MIR515-2-201ENST00000384883 83 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 MIR515-1-201ENST00000384884 83 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC097463.2-201ENST00000421074 142 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 GTF2IP13-201ENST00000438487 386 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 MRPS17P3-201ENST00000465453 385 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC118282.2-201ENST00000508739 374 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AC021739.1-201ENST00000559631 174 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 AL589743.1-201ENST00000551932 2712 ntBASIC0.32□□□□□ -2.36
CSMD3Q7Z407 SNORD115-3-201ENST00000363100 82 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 MIR135A2-201ENST00000384854 100 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 TMSB4XP8-201ENST00000402089 135 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 MIR1267-201ENST00000408723 78 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 RPL37P10-201ENST00000412884 288 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 TMSB4XP6-201ENST00000415187 135 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 FAM204CP-201ENST00000424489 642 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 TMSB4XP1-201ENST00000424567 135 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 RSL24D1P8-201ENST00000434442 492 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 MTCO2P20-201ENST00000437339 673 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC012414.6-201ENST00000568241 401 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC004067.1-201ENST00000608733 700 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AL391597.1-201ENST00000618707 694 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 Y_RNA.572-201ENST00000384757 98 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 NCOR1P3-201ENST00000420479 303 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 RPL26P6-201ENST00000440913 438 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 NACAP3-201ENST00000552100 481 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AL359212.1-201ENST00000556608 614 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC009233.1-201ENST00000616477 371 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 MIR8065-201ENST00000620577 100 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 NDUFS5P1-201ENST00000405668 289 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 RNU2-36P-201ENST00000410361 191 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC010385.1-201ENST00000412374 256 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 SFR1P2-201ENST00000421841 730 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AL121652.1-201ENST00000608851 448 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 AC009974.1-201ENST00000608881 455 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 U6.107-201ENST00000637108 79 ntBASIC0.31□□□□□ -2.36
CSMD3Q7Z407 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.31□□□□□ -2.36
CSMD3Q7Z407 Y_RNA.18-201ENST00000362461 102 ntBASIC0.3□□□□□ -2.36
CSMD3Q7Z407 Y_RNA.255-201ENST00000364581 97 ntBASIC0.3□□□□□ -2.36
CSMD3Q7Z407 RNU6-140P-201ENST00000384566 108 ntBASIC0.3□□□□□ -2.36
CSMD3Q7Z407 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
CSMD3Q7Z407 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
CSMD3Q7Z407 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.3□□□□□ -2.36
CSMD3Q7Z407 AC073614.1-201ENST00000438690 650 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 305.3 ms