Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AC007785.2-201ENST00000598627 1916 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU1-14P-201ENST00000362759 152 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU6-774P-201ENST00000363238 107 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU6-527P-201ENST00000363425 104 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 SNORD113-8-201ENST00000363497 74 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.200-201ENST00000364018 102 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU4-9P-201ENST00000364951 139 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU6-102P-201ENST00000384485 104 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 MIR325-201ENST00000385260 98 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 SNORD78.2-201ENST00000391076 69 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 Z98941.1-201ENST00000407764 100 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RPL23AP26-201ENST00000412728 464 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AL358453.1-201ENST00000422522 250 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AC009237.8-201ENST00000445492 379 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RN7SL93P-201ENST00000463035 293 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AC025946.2-201ENST00000603398 234 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 SCARNA4-202ENST00000625402 129 ntBASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF111Q6ZNA4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 Z73965.1-201ENST00000623412 2297 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AL157777.2-201ENST00000258070 137 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU6-105P-201ENST00000363909 104 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU1-132P-201ENST00000364300 164 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNA5SP366-201ENST00000365454 123 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU6-926P-201ENST00000384075 107 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AL139156.1-201ENST00000412785 841 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AL138752.1-201ENST00000452964 351 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 UQCRHP4-201ENST00000471686 272 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RPS26P21-201ENST00000475397 348 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RPL23AP49-201ENST00000492925 468 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RPS23P5-201ENST00000495419 428 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNA5SP49-201ENST00000516450 115 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNA5SP519-201ENST00000516480 119 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNA5SP73-201ENST00000516744 108 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 MIR4782-201ENST00000577987 79 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 ARF4P1-201ENST00000605447 541 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 BRDTP1-201ENST00000605735 677 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 FAM27D1-201ENST00000612308 341 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 MIR6798-201ENST00000612887 67 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 MIR6758-201ENST00000620653 63 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 MIR7702-201ENST00000621931 59 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AC241585.2-209ENST00000638217 143 ntBASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF111Q6ZNA4 AC008568.2-201ENST00000623862 2313 ntBASIC3.96□□□□□ -1.77
RNF111Q6ZNA4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF111Q6ZNA4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.77
RNF111Q6ZNA4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RNF111Q6ZNA4 AC022893.2-201ENST00000564832 3296 ntBASIC3.96□□□□□ -1.77
RNF111Q6ZNA4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 MIR383-201ENST00000362257 73 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 SNORA62-201ENST00000365493 153 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RNU6-968P-201ENST00000384076 107 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 HMGN2P8-201ENST00000391458 268 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 MIR1179-201ENST00000408703 91 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 MIR1298-201ENST00000408783 112 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RPL23AP46-201ENST00000438548 490 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 Z82210.1-201ENST00000440037 231 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AC104332.1-201ENST00000440471 797 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 CYCSP32-201ENST00000440548 321 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AC009296.1-201ENST00000443146 155 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AC124916.1-201ENST00000444020 547 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AL353705.4-201ENST00000449661 238 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RPS29P19-201ENST00000479709 171 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RN7SL691P-201ENST00000494487 301 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 UBE2CP3-201ENST00000502715 450 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms