Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 DYNLL1P5-201ENST00000467158 270 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 Y_RNA.672-201ENST00000516289 104 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 RNU6-572P-201ENST00000516724 80 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC109446.2-201ENST00000567872 497 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 MIR4782-201ENST00000577987 79 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC025165.5-201ENST00000602802 578 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 RNU6-91P-201ENST00000607774 107 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC012360.2-201ENST00000609349 391 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC013412.1-201ENST00000610687 192 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AL603755.1-201ENST00000619504 163 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 AL359757.2-201ENST00000624309 274 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 U6.99-201ENST00000637524 83 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATL3Q6DD88 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATL3Q6DD88 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.15□□□□□ -2.07
ATL3Q6DD88 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ATL3Q6DD88 AC103710.2-202ENST00000641454 2853 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 Y_RNA.22-201ENST00000362492 102 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 RNU6-169P-201ENST00000365336 107 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 MIR558-201ENST00000384920 94 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 SNORA46.1-201ENST00000391069 153 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 MRPL42P2-201ENST00000403169 426 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 RNU2-63P-201ENST00000410792 194 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 RPL23AP30-201ENST00000432419 501 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC003071.1-201ENST00000451219 789 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC008526.1-201ENST00000509149 338 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC022616.3-201ENST00000523940 148 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AL022154.1-201ENST00000604698 785 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC091304.6-201ENST00000619761 202 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 AC007494.3-201ENST00000624660 743 ntBASIC2.14□□□□□ -2.07
ATL3Q6DD88 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATL3Q6DD88 RNA5SP125-201ENST00000364843 120 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL049545.1-201ENST00000401856 572 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 CIR1P3-201ENST00000405137 479 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 SNORA3.2-201ENST00000408221 125 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 RN7SKP158-201ENST00000410453 326 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL353621.1-201ENST00000418219 243 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC119618.1-201ENST00000434191 222 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL353705.4-201ENST00000449661 238 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC092001.1-201ENST00000453012 261 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 RN7SL429P-201ENST00000479090 223 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 RN7SL489P-201ENST00000486185 223 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 RN7SL327P-201ENST00000488659 223 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 FAM92A1P2-202ENST00000504766 877 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC010486.2-201ENST00000505572 483 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AF213884.2-201ENST00000510417 903 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 SNORA31.19-201ENST00000517079 126 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL157871.3-201ENST00000557231 293 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 AC005771.1-201ENST00000585581 349 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 RN7SL853P-201ENST00000617250 223 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 SDR42E1P4-201ENST00000620894 481 ntBASIC2.13□□□□□ -2.07
ATL3Q6DD88 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
ATL3Q6DD88 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.12□□□□□ -2.07
ATL3Q6DD88 RNU5F-7P-201ENST00000363696 115 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ATL3Q6DD88 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ATL3Q6DD88 RPS3AP36-201ENST00000398190 775 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 RNU6-1025P-201ENST00000410629 104 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 RPS3AP3-201ENST00000411933 242 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC097463.2-201ENST00000421074 142 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC009961.2-201ENST00000435771 251 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC104850.1-201ENST00000435940 476 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.12□□□□□ -2.07
ATL3Q6DD88 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.12□□□□□ -2.07
ATL3Q6DD88 CYP2C59P-201ENST00000457790 269 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 AP001324.2-201ENST00000461163 319 ntBASIC2.12□□□□□ -2.07
ATL3Q6DD88 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.12□□□□□ -2.07
ATL3Q6DD88 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms