Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4□□□□□ -1.77
E4F1Q66K89 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
E4F1Q66K89 HSPE1P5-201ENST00000561489 272 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4□□□□□ -1.77
E4F1Q66K89 AC087499.8-201ENST00000578406 226 ntBASIC4□□□□□ -1.77
E4F1Q66K89 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4□□□□□ -1.77
E4F1Q66K89 SRGNP1-201ENST00000603392 451 ntBASIC4□□□□□ -1.77
E4F1Q66K89 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4□□□□□ -1.77
E4F1Q66K89 AC090617.7-201ENST00000623952 126 ntBASIC4□□□□□ -1.77
E4F1Q66K89 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4□□□□□ -1.77
E4F1Q66K89 MTND5P27-201ENST00000428871 1720 ntBASIC4□□□□□ -1.77
E4F1Q66K89 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4□□□□□ -1.77
E4F1Q66K89 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
E4F1Q66K89 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
E4F1Q66K89 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
E4F1Q66K89 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
E4F1Q66K89 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.99□□□□□ -1.77
E4F1Q66K89 U3.6-201ENST00000363622 211 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 RNA5SP424-201ENST00000390988 115 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 MIR1252-201ENST00000408861 65 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 EIF4EP2-201ENST00000422816 654 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 NDUFB4P6-201ENST00000436819 366 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.99□□□□□ -1.77
E4F1Q66K89 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
E4F1Q66K89 AMZ2P1-203ENST00000565833 850 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.99□□□□□ -1.77
E4F1Q66K89 AL021879.1-201ENST00000611756 288 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 AC083809.1-201ENST00000615051 472 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 U2.1-201ENST00000618978 145 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 RNA5SP196-201ENST00000625967 102 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.99□□□□□ -1.77
E4F1Q66K89 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
E4F1Q66K89 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
E4F1Q66K89 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.99□□□□□ -1.77
E4F1Q66K89 USP8P1-201ENST00000494673 3183 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 MFSD8-236ENST00000641509 4050 ntBASIC3.99□□□□□ -1.77
E4F1Q66K89 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AC007656.2-201ENST00000624902 4547 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
E4F1Q66K89 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
E4F1Q66K89 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
E4F1Q66K89 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
E4F1Q66K89 SPRR2C-201ENST00000290702 219 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 FTLP6-201ENST00000355274 422 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
E4F1Q66K89 RNA5SP97-201ENST00000365006 84 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 RNA5SP283-201ENST00000365604 119 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 RNU6-658P-201ENST00000384606 106 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 MIR628-201ENST00000385229 95 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 PPIAP31-201ENST00000405422 495 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 RNU2-71P-201ENST00000411395 189 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 CRYBB2P1-203ENST00000415709 538 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AL139247.1-201ENST00000422768 325 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.98□□□□□ -1.77
E4F1Q66K89 DYNLT3P2-201ENST00000442517 295 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 OSTCP8-201ENST00000445117 448 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 RN7SKP289-201ENST00000517244 295 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.98□□□□□ -1.77
E4F1Q66K89 AC005476.1-201ENST00000554427 397 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 MYL12BP1-201ENST00000569826 507 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 MIR4700-201ENST00000578311 74 ntBASIC3.98□□□□□ -1.77
E4F1Q66K89 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.98□□□□□ -1.77
E4F1Q66K89 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
E4F1Q66K89 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
E4F1Q66K89 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
E4F1Q66K89 RNU6-78P-201ENST00000362897 107 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RNU6-595P-201ENST00000363944 107 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RNU6-72P-201ENST00000384285 79 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 SNORA51.11-201ENST00000384442 131 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RNU6-713P-201ENST00000384761 107 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 MTHFD2P2-201ENST00000407725 247 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.97□□□□□ -1.77
E4F1Q66K89 AC016769.2-201ENST00000414815 475 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.97□□□□□ -1.77
E4F1Q66K89 AC092047.1-201ENST00000424997 240 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 HIGD1AP2-201ENST00000446367 280 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
E4F1Q66K89 PCNPP5-201ENST00000452246 481 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RN7SL323P-201ENST00000494712 295 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RPL30P5-201ENST00000494923 336 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.97□□□□□ -1.77
E4F1Q66K89 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.97□□□□□ -1.77
E4F1Q66K89 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.97□□□□□ -1.77
E4F1Q66K89 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 MIR5696-201ENST00000578474 85 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RN7SL703P-201ENST00000578485 302 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 VN1R91P-201ENST00000594377 169 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AL590392.1-201ENST00000604960 446 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms