Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 SNORA31.6-201ENST00000516241 130 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 RNA5SP503-201ENST00000517047 117 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 ACA59.2-201ENST00000517061 156 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 RN7SKP40-201ENST00000517211 242 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 AC024909.2-201ENST00000553035 286 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 SNORD53-201ENST00000579969 78 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 AC092656.1-203ENST00000624134 423 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 MIR7157-201ENST00000635801 60 ntBASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC30Q5VVM6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 SNORA25.6-201ENST00000364121 118 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RNU6-1042P-201ENST00000384204 107 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RNU6-301P-201ENST00000384277 107 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 GSTA9P-201ENST00000406231 611 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 U3.37-201ENST00000408528 213 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RNU4-46P-201ENST00000410818 138 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RNU4-53P-201ENST00000410828 140 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL663109.1-201ENST00000411498 844 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL360271.2-201ENST00000447710 161 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL356010.1-201ENST00000456364 102 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 TPT1P7-201ENST00000458300 517 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 RPS3AP17-201ENST00000472594 777 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC008413.1-201ENST00000511864 177 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC105417.1-201ENST00000514691 285 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC092325.1-201ENST00000566449 554 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AC008945.2-201ENST00000606056 604 ntBASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC30Q5VVM6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.93
CCDC30Q5VVM6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC073464.1-201ENST00000429823 534 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 RNU6-405P-201ENST00000516637 110 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 SNORA31.15-201ENST00000516771 132 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 FAM92A1P1-201ENST00000528023 890 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC087683.1-201ENST00000591187 441 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC060766.3-201ENST00000591442 263 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC080013.6-201ENST00000606185 215 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 RNU6-91P-201ENST00000607774 107 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AL449363.1-201ENST00000617815 186 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 FO624990.1-201ENST00000636373 85 ntBASIC3.02□□□□□ -1.93
CCDC30Q5VVM6 AC006020.1-201ENST00000420179 1854 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL359854.1-201ENST00000614203 1594 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 SNORD3E-201ENST00000362899 217 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 Y_RNA.159-201ENST00000363674 87 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL353621.1-201ENST00000418219 243 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 RPS15AP9-201ENST00000439856 381 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 MTND1P18-201ENST00000448191 573 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 MTAPP1-201ENST00000489154 819 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC108078.1-201ENST00000508073 725 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 TBCAP3-201ENST00000512475 312 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 BTF3P12-201ENST00000519620 469 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC091544.4-201ENST00000555268 342 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 MIR4703-201ENST00000577728 79 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 MIR3117-201ENST00000584034 78 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC025449.1-201ENST00000603896 529 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL049779.4-201ENST00000604500 156 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 NDUFA8P1-201ENST00000605525 367 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 RMST_4.1-201ENST00000616886 107 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC010297.1-201ENST00000623948 149 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AC138627.2-201ENST00000624202 601 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 AL109809.4-201ENST00000603520 2185 ntBASIC3.01□□□□□ -1.93
CCDC30Q5VVM6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
CCDC30Q5VVM6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3□□□□□ -1.93
CCDC30Q5VVM6 AC080128.1-201ENST00000474389 1917 ntBASIC3□□□□□ -1.93
CCDC30Q5VVM6 AL139276.1-201ENST00000311910 1001 ntBASIC3□□□□□ -1.93
CCDC30Q5VVM6 MIR21-201ENST00000362134 72 ntBASIC3□□□□□ -1.93
CCDC30Q5VVM6 Y_RNA.296-201ENST00000364930 108 ntBASIC3□□□□□ -1.93
CCDC30Q5VVM6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms